CANTATAdb - search

Detailed information on CNT30709015

BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 2e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30176340	Glycine max	Vigna angularis	70.76	60.24	90.34	559	forward

Expression of CNT30709015

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLTCRGRSCSFTLSSAKASGSSARPNGSKLPPG*

>peptide 2 (38 aa)
MLTLPTSGADGPSFTALPAKDGEERAMEEAAAIFKTLG*

Sequence

>CNT30709015
GTTTTCGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAATTCACATTATCTGAAGTACATTGCAATAACATATACTTCACCAAACACA
AATCTAAAAACTCTCAAAAGTCCACAAGTCATCCTTTTCTTTCATGCTCACTTGCCGGGGACGAAGTTGTTCCTTCACCTTAAGCTCAGCAAAAGCCTCT
GGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCACCAGGGTAGATTGGGTCAGTGACCTCACCGAGGGGCCCACCAGCAATACGATAACCCTCAACAG
CACCCATTAGGATAACTTGGGTGGCCCAGATGGCGAGGATGCTCTGGGCGTGGACAAGGCTTGGGTTGCCCAAGTAGTCCAGCCCACCCTCGCTGAAGAT
CTGGGACCCGGCCTTGAACCACACAGCTTCTCCAAACTTGACCCCGTTGCGGGACAATAGTTCGGGGAAGACGCAGCCCAAGGCCCCGAGCATGGCCCAC
CTGGAGTGGATCACTTCGAGCTCACGGTTTCTGGCGAAGTGAGGTAGGACGGGGGCTCGCCAGAGAATGGGCCCAAGTACTTGACGCGGTCTGGGCCGTA
CCATGGGCTTCCGGAGGAGGCCTGCTTGGTGACGGTCTTCCTCATGCTGACCCTCCCGACTTCGGGGGCTGATGGGCCCAGCTTCACGGCCTTGCCAGCC
AAGGATGGGGAAGAGAGAGCCATGGAGGAGGCTGCTGCCATTTTTAAAACTCTAGGATGAGCTTGCTTTCTGCCTTGTGTTATGGAGTTG