Detailed information on CNT30708301


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000595, E-value = 2e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376000Glycine maxArabidopsis thaliana12.1921.1294.9479forward
CNT30538793Glycine maxBrassica napus12.520.9895.0681forward
CNT30309894Glycine maxCamelina sativa12.0437.3294.8778forward
CNT3078045Glycine maxBrassica juncea12.0420.7494.8778forward
CNT30217757Glycine maxKalanchoe fedtschenkoi13.1221.297.6585forward
CNT30704991Glycine maxPrunus avium12.1925.5798.7379forward
CNT30725207Glycine maxLupinus angustifolius12.0421.6797.4478forward

Expression of CNT30708301

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLLAENNAVTAFANQHDLLYAFLILSLLFFAYKWQPDCFISTAIV*

>peptide 2 (33 aa)
FSPNSIEEFLSPLTHYTCRLGLWVGAQNFVIIC*

Sequence

>CNT30708301
TTTCTCTCCAAATTCGATTGAGGAATTCCTAAGCCCATTGACTCATTACACGTGCAGGCTGGGCCTTTGGGTTGGAGCCCAAAACTTCGTCATAATTTGC
TAGGGTTTCTTGTGGGCTATAAATTGTTGTAACCTTCACAAATCCTTTCGTTTTAATCCTCTGTTACCTCTCAGCAGCTTAGGCTAGGGTTCAGAAACGA
AAAAGGGTTCGGTGTTCAGTTCGCGATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAG
TAGTGCGTTAATCCAAGTAGTTGATTTCCGTTGCTTTTATAATTATGTTGTCAAATTGGGCACCCAGTTGTTAGAGGCACTGGTTTCTCCTTTTTGATGT
TTTGATACATTTTTGTTTGGTTTAATTCGTCTTATGTTATTAGCTGAAAACAATGCTGTTACTGCGTTTGCGAATCAACATGATCTCTTATATGCATTTC
TGATTCTCTCTTTGCTATTTTTTGCTTATAAATGGCAGCCAGATTGTTTTATATCTACTGCAATTGTTTAGGGTTTAATTGAGCTCGTTAATTCAAACAT
TGTATCCCGATGCTAGATCTGAAGTCTTTATCCATTCAATTTTTAGAT