Detailed information on CNT30704623


BLAST search results

BLAST vs Swiss-Prot:
sp|P05993|PAPA5_CARPA, E-value = 2e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376792Prunus aviumArabidopsis thaliana5.236.4284.43122forward
CNT3070872Prunus aviumQuercus suber9.830.9184.78230forward
CNT3046025Prunus aviumPrunus dulcis25.0469.6797.96588forward
CNT30588616Prunus aviumMusa acuminata4.1740.1684.6998forward
CNT30599767Prunus aviumFraxinus excelsior5.3230.2786.4125forward
CNT30714701Prunus aviumMalus domestica golden22.9636.8489.8539forward

Expression of CNT30704623

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVLLLKHKHHSLCISIKDKDTSTNQTALLLHYQDKQ*

>peptide 2 (36 aa)
MLQQQLRPWSLHRRYSGRCRFCRIPSLPSSLPMSSL*

>peptide 3 (49 aa)
MNETVKQNNGNLLMVLLLKHKHHSLCISIKDKDTSTNQTALLLHYQDKQ*

>peptide 4 (58 aa)
MTPLNTNKAITKTYITYSRHNNYNIQTYFLQIRKPNSVNNYISTISNLFQHVLRLRNM*

>peptide 5 (89 aa)
MTLHQHMFAAICSSSRETTLKLATFAAILLLSNLQVPRSVPVYGYSSSFISPPALSVYSKALFMSPPLHPESHEPASSGSHCNFFRKNA*

Sequence

>CNT30704623
GGAAGAACTTGCATATTAACACATAAAAAAGGACATTTAAGCTGTTCTGGCAAACCCCAAGAATTATAAAATACATTGGTGGTGCTATGTTTAGTTTTAT
GTTTTGCAAGGCTGACTGCTGACAGTGTCAACAACAATTGGAGTTGCACAAATAAATGTCTCCGAACTTGTATATACATTACACATAGATATTCCAACTG
CAATTATAAGTTGGGGTTGAAGCCTACTGTGGGTTGGTCTCAACAGATGCTGCAGCAACAGTTGAGACCATGGAGTCTACACCGCAGATATTCCGGCCGT
TGCAGATTTTGTAGAATCCCTTCTCTCCCCAGTTCTCTCCCCATGAGTTCTTTATGATCCAGTATGGCTTCTCCTTCATTCTGATGGGAGAATAGCCAGC
TGCACCATAACCCACGAGCAACACCCCATGATCCAATCTCTTTGAGCAAATGTAGGGGCATGACACTCCACCAACATATGTTTGCAGCAATTTGTTCTTC
ATCAAGGGAGACAACACTGAAATTGGCAACCTTTGCTGCAATTTTGCTCTTGTCAAATTTGCAGGTTCCACGATCAGTACCAGTGTATGGATATTCTTCT
TCCTTCATTAGTCCACCAGCTTTGAGTGTGTACTCAAAGGCACTGTTCATGAGCCCACCATTGCATCCAGAGTCGCATGAACCTGCCTCCTCTGGATCAC
ACTGCAATTTTTTCAGAAAGAACGCATAAGATATAGAAATTTAAGGAACTAACCTTTTTCTAGGACATCACTGAATGAATGAAACAGTCAAACAAAATAA
TGGCAATCTGTTAATGGTGCTACTGTTAAAACACAAGCACCATTCATTATGTATTTCTATTAAGGATAAAGACACAAGCACCAATCAGACTGCACTGCTT
CTGCATTATCAAGATAAACAATAGCAATAAAAAAATTTCAGCAGCAAGAACACATTCTATTAAAAATCCTTCAACGCAGCAAGCAGATATATGACCATTT
AACTTTTTACATCCAAATATAACTTCTTGCTACATCTCGTAATAATAGCTAAAACAAAAACCAACTTTATTTGTCATTTACTAAATAAAACCAAAATAAA
AATCTCACAGTTAATGTATTATCATGTCACCCCTGAACACCAATAAGGCAATAAGGCAAACATAGCTAAAACAAAATCCAACTTTATTTTTCATTTACTA
ATTAAAACAATGGCAATCTGTTAATGGTGCTACTGTTAAAACACAAGCACCATTCATTATGTATTTCTATTAAGGATAAAGACACAAGCACCAATCAGAC
TGCACTGCTTCTGCATTATCAAGATAAACAATAGCAATAAAAAAATTTCAGCAGCAAGAACACATTCTATTAAAAATCCTTCAACGCAGCAAGCAGATAT
ATGACCATTTAACTTTTTACATCCAAATATAACTTCTTGCTACATCTCGTAATAATAGCTAAAACAAAAACCAACTTTATTTGTCATTTACTAAATAAAA
CCAAAATAAAAATCTCACAGTTAATGTATTATCATGTCACCCCTGAACACCAATAAGGCAATAAGGCAAACATAGCTAAAACAAAATCCAACTTTATTTG
TCATTTACTAATTAAAACAAAAAAACGCAGTTAAAGTATTATCATGACACCCCTGAACACCAATAAGGCAATAACCAAAACATATATAACATACAGCAGA
CACAACAATTACAATATACAGACATATTTCCTGCAAATTAGAAAACCCAACTCCGTGAACAATTACATCTCTACAATTTCTAACCTTTTCCAACATGTGT
TGAGACTTAGGAACATGTAAAGACACCTTGACGCAAAAAATGAACTTGAAAACACAGACACCGTCTCAGGTTTTGGTTTAAATGCAATCAAAAAGTTGCA
GTTTGTGACTTTCAGTACTGACAGAGTCAGCTCGAGACAAAGACAAGCAGAAAGAAGCAGCTAACTATTCATCGTCATCCAGATTCCATGTGGGTCTCAC
ATGGAGACCACAATCACAGATAATTTGAACAAGACAATTGTAAGAAATATTCTGACAACAAAAATACCCTAAAAAGGGACAATCGTAATTACTAATTATC
GTGTATTCGCAAATTAAAATCAAACAATCAACCATTAGAAATCCCAATTTTCTTCATAAACAGAAGCACCAAATAATAATTCTTTTCAAAATTTTTTTTA
AAAAAGTCAAACCTCGTGATCACAATCCACAAGCTGCTGCTCACTGAGGCTCACAAGCTCTCCAGTCGCCAGAAAGTGGGCACCTTCCAAAGCTCCTGTA
GTACTGAAACTCCAGCACGACCCGCACGAGCCCTAATTTCACAAAAAC