Detailed information on CNT3070360


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524209Quercus suberSetaria italica53.338.1981.58152forward
CNT30617858Quercus suberSesamum indicum26.6721.986.8476forward
CNT30709157Quercus suberGlycine max58.626.4786.23167forward
CNT30558966Quercus suberActinidia chinensis35.4428.6985.15101forward
CNT30237993Quercus suberBrassica oleracea29.8217.2892.9485forward
CNT3074841Quercus suberBrassica juncea69.8240.286.93199forward
CNT30612225Quercus suberArabis alpina56.1463.2483.75160forward
CNT30650801Quercus suberRosa chinensis77.5416.8286.43221forward
CNT30365067Quercus suberSorghum bicolor53.3325.1782.89152forward
CNT30620724Quercus suberCajanus cajan77.5434.4284.16221forward
CNT30117918Quercus suberOryza nivara53.3316.9180.26152forward

Expression of CNT3070360

Peptides detected in this lncRNA

>peptide 1 (33 aa)
VETVCLEGSRSAEILNLVDEFVTSVVSVTGHAF*

>peptide 2 (33 aa)
MPSEYLLVRALPKASITAKEVKFSEAISSMPRH*

Sequence

>CNT3070360
GGTCGAGACGGTATGTTTGGAGGGCTCGAGATCGGCAGAGATTCTCAATCTCGTCGATGAATTCGTTACCTCCGTAGTATCGGTTACCGGGCATGCCTTC
TGAGTATTTGTTGGTCAGGGCACTGCCTAAGGCTTCAATCACAGCGAAGGAGGTGAAGTTCTCGGAAGCGATAAGCTCGATGCCACGGCATTGACAACGC
TTCTCCTTCTCGATTAGATCGTGGATATCTGGGTCCACTGCTTTCAGAGGTGTGTTTCCCCAAGCGTTCACGGGATCCATTTTTA