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Detailed information on CNT30703529


BLAST search results

BLAST vs Swiss-Prot:
sp|P09044|G3PB_TOBAC, E-value = 8e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515727Quercus lobataJuglans regia43.6964.0692.22180forward
CNT30526307Quercus lobataPhaseolus vulgaris57.04104.4484.68235forward
CNT30709193Quercus lobataGlycine max36.8926.6286.84152forward
CNT30172884Quercus lobataTrifolium pratense33.9820.4787.14140forward
CNT30598889Quercus lobataFraxinus excelsior16.529.1888.2468forward
CNT30361627Quercus lobataSorghum bicolor27.9116.5281.74115forward
CNT30481607Quercus lobataChara braunii20.3913.9384.5284forward

Expression of CNT30703529

Peptides detected in this lncRNA

>peptide 1 (83 aa)
LYPHSLSYQATTLTISSPMTIVNEESTTDTLGVGTRSAMPLSLPLSWGSTRDTALAAPVLVGTMFNAAALARLKSLCEASKSL*

Sequence

>CNT30703529
CTGTATCCCCATTCATTGTCGTACCAAGCAACCACCTTGACCATATCATCACCCATGACCATTGTCAATGAAGAGTCAACAACGGACACATTAGGAGTAG
GCACACGGAGTGCAATGCCATTGAGCTTGCCCTTGAGCTGGGGTAGCACTAGAGACACGGCCTTGGCTGCACCAGTGCTTGTTGGTACTATGTTCAATGC
TGCAGCCCTGGCTCGCCTCAAGTCTCTGTGTGAAGCATCCAAGAGCCTCTGAAGATACACAACGTAGGCTATAACTTTTTAAGTACCTTTATTTGAAATC
ATTATAACATTGAGCATTTTTATAGGAATTTTTTTTTTTTTTTTAATTATTGTAAGAGCACATTATTTGATCTCTTTAAATTGTTGGAATGTTGTACTCA
ATGAAAACAAAA