Detailed information on CNT30699837


BLAST search results

BLAST vs Swiss-Prot:
sp|P40691|A115_TOBAC, E-value = 3e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530112Quercus lobataEucalyptus grandis25.1119.5488.1459forward
CNT30316771Quercus lobataCorylus avellana47.2324.2481.98111forward
CNT3070514Quercus lobataQuercus suber47.2345.4981.98111forward
CNT30566887Quercus lobataActinidia chinensis25.1119.1688.1459forward

Expression of CNT30699837

Peptides detected in this lncRNA

>peptide 1 (75 aa)
SDEDFVGKRAVDVRSIEKGDTTVDGMMDESNHVFFGLWRGHAHADLVPKRPVPVNPASSSPLLQPLLCFFFNNYY*

Sequence

>CNT30699837
TTCCGATGAGGATTTCGTTGGTAAGAGGGCCGTAGATGTCAGAAGTATCGAGAAAGGTGACACCACTGTTGATGGCATGATGGATGAGAGCAATCATGTC
TTTTTTGGGCTTTGGAGGGGTCATGCTCATGCAGACCTTGTGCCGAAACGTCCAGTCCCTGTAAACCCAGCTTCATCCTCTCCACTCTTACAGCCATTGT
TGTGCTTTTTCTTCAACAACTACTACTAGTTGACC