Detailed information on CNT30696983


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30110563Oryza sativaOryza longistaminata35.6942.6299.19985forward

Expression of CNT30696983

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLQRVKLGMFSETIYHYQNCSISLNVRQALYKIHG*

>peptide 2 (30 aa)
MIKDTVEGLISTGWLELMCGLSCPIGYSIC*

>peptide 3 (45 aa)
MAGTNVWPFMPHWLLYMLALPLMSVFYSEHSASCEVEEWGYVHAC*

>peptide 4 (53 aa)
MERRHRPRAAAAAAASASVSAAAHHPGGVRVHPYHTSAGVVKGKLHTRKAATT*

>peptide 5 (59 aa)
MIFFLRVDYQDSDTRKGNRRTRGCERGSKTLGSSADLSILASGILLRGKQIKSHNRYFS*

>peptide 6 (54 aa)
MLPCPGEGMISRCPHSPMPFGGAFQPRMIDDMQHVLELSQYRRAVTIQEHISST*

>peptide 7 (59 aa)
MKSASCKLRHETVAYAFSSKSLLLALDGRIFAYFLCFLISLTCFFCVLSFILFLNLDFS*

Sequence

>CNT30696983
CCCAAAGCCTCCACTAAAGTAGTACTAGTATTCTAGAAGCTTCGGATGGAGCGCCGCCACCGTCCTCGCGCCGCCGCCGCCGCCGCCGCTTCTGCCTCCG
TCTCCGCCGCCGCCCACCACCCGGGGGGAGTGCGTGTACATCCCTACCATACGTCGGCAGGGGTGGTGAAGGGGAAGCTCCACACCCGCAAGGCCGCGAC
GACGTAGTACTACCACGTCAGTTCGAACAACTCCATCCAGGAGGCAATTTCAGAAATGGTGGAGATAGCCCATGATTAAGGATACGGTGGAGGGGCTCAT
CAGCACTGGATGGCTGGAACTAATGTGTGGCCTTTCATGCCCCATTGGTTACTCTATATGTTAGCATTGCCACTCATGTCTGTATTCTATAGCGAACACA
GTGCTTCTTGTGAAGTTGAAGAATGGGGCTATGTGCATGCATGCTGAGGCGGCTGTGCACTGCTACATTAACATGATATATATACCGACTATGAATCTAT
GATTTGGCACAGGTTCATCAAGGAGTAGTTGGGGGTCAGATTCCAAGGATTGGTTGGCAGATTGATCCAATTTCGCACTCTGCAATTCAGGATTACTGCC
TAGGAATTGATGATTTTTTTTCTCCGGGTTGATTACCAAGATAGTGATACGCGGAAAGGGAACAGAAGAACTCGAGGTTGTGAGAGGGGCTCCAAGACTC
TCGGCTCGTCAGCTGATTTAAGCATCTTGGCTTCTGGAATTCTTTTAAGGGGAAAGCAAATTAAATCTCACAACAGATACTTTAGCTGATGCTCTAGCTC
TTGCTCAGCACCATGATGCTGTTACAGGAACAGAGAAGCAACATATCACAAATGACTATGCGATGAGATTATCAATTGGCTATACACAAGTGAGCTCTCA
AGAATATTCTTATTCATATTTGATGTCTTCTTTTGGGATTTGATCTCTTCAATGAGTCAGGCTCAAAATAGCGTGTCCATCCCAAACAACAAAAATTGGT
CAGTGCCTGCTCTGTACATCCCCATGGATTAGCAGGAGGAAGAAGAAGGAAGAGGCAGAGAAGAACAGCTAATTCCCTCATTCATTGCTTAACAGCGTAT
ATGTGGCTTCAACTGACAAGTATGAAAGATTGGATGCATCAGGCTGCCCTCTGGATGTTGTAATTTGTATGCATTTGGACCATTTCGAGCAAGAACATCA
TAGGGGCCGAGAATTTATAGACCCACTTAAGATATGACATATTGACAACTGAAGATTGAGTATAAGGTTGCAGCTTGCCAGCCTCAGATATACACTGGCG
ATTCAGTATAAGGTTGCAGCTTCAGATATTCTTTGTCACCCACAGGAAACTCCAGCAGATATCTGCTTTTATCAGCAATATTCTTCATTCTCAAATGTTC
TCTAGCCAACTGATTCTTCAAAAATTCAGAATAAGCAGCCCTTGTTGTCAGCATATCAGTGGCTTCATTATCAGCTGAAGCAACTAGGTTCAGTGCCAAA
CAATGCCTTGTGAGGGGAGCTACCCAAGGTAGTGTGGAAACTTGTATTGTACCAGAATTCAGCAATGGGAAACCAAGAGGGCCACTTCCTTGGCGTTTCA
TGGAGTGTGCTTTGTAGGTATATTTCAAGGTACTGATTAATCCGCTCTGTCTGTCCATCAGGCTGTGGATGGAGTGCGGTACTAGGTTCAATTGAGTATC
AAGCTTCGCAAGCAAGTCGTTCCAAAATTACTGGTGAGTAATCTATATATCCTGATCAGTAACTATTAATGTAGGAATACCATGAGTTTTAGCAACATTA
TCCATGACAAATTCTGCTACTATGACTGCTGAAATTGGATGCTTCAGAGGGTAAAATTGGGCATGTTCAGTGAAACAATCTACCACTACCAAAATTGCAG
TATATCCCTCAATGTGAGGCAAGCCCTCTATAAAATTCATGGATAAATCTTACCAAGCAGTGAAGAACCTTCAGTGACTGGTGGAAGGGTGAGAAGTCCA
GGTAAGGACTCCATTCATCAACAGACAACATGACAGTGAGGAATCCTTTACCATAAATGAAAATCTTCTGATTTTGTGGGCTAAAGGCTGTTCAATTAAG
CCACTGGATGACCATTTTGACTCAGCGCAAAGGTTGACCGTTGGATTTGCCACTGGGAATTCATGCTGCCTTGTCCTGGAGAAGGCATGATATCACGCTG
TCCCCATTCCCCAATGCCTTTTGGCGGTGCTTTCCAGCCCAGGATGATAGACGATATGCAACATGTGTTAGAGCTGTCACAATACAGGAGGGCTGTCACA
ATACAGGAGCACATTTCGAGCACATAGAGTTGGCTTGGATGACGGGCAACCATGTACATTGTGCCAATTGGTCGATTCTGCACAGTGAGAAGTAATCAAG
TAAAGATGTGGTGCAGGCCATGAAATGTACAAACAGGAAGACAGATAAATATATTGAGGCATAATTGCGTCGAACTCTCAGCTTTTCTGAGATTATATTA
AGTAAATTTTCTCACCTCTTTTGCCGTGGATAACCTTCTGTGAGTGTCAGATCAGAAATCAGTTGTGTTCAGATGAAATCTGCTTCCTGTAAACTCAGGC
ATGAGACTGTAGCATATGCATTCTCTAGCAAAAGCCTATTATTAGCCTTAGATGGCAGGATTTTTGCTTATTTTCTATGTTTTCTTATCTCTCTTACGTG
TTTCTTTTGTGTTCTCTCTTTTATATTATTCTTGAATCTTGACTTCTCTTAAAAGTCTGG