Detailed information on CNT30695663


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102889Oryza sativaOryza rufipogon29.280.34100805forward

Expression of CNT30695663

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MYMLYLLPAGRYTRVVYLCLFVHHWNSLKHICFLRNERNQEECQDKISQQCSDCSL*

>peptide 2 (58 aa)
MEPVLWSTGVAVHIALKSLPMLCASSLPPSPSHWAAASSRICCTAIALLLCLSYLPLT*

>peptide 3 (38 aa)
MLHRHCITTLSIVPTSNVSSKEINLQLTPSPHMPLTSL*

>peptide 4 (48 aa)
MKGTRKNAKTRSLSSVLIVVFDLVVHTTLHSSRPCEIHKLVSFAGTSH*

>peptide 5 (35 aa)
MIPKHIYSTDTQVLGVRTSLYGADYTINFSYHIIS*

Sequence

>CNT30695663
TTGGATATCTCAAGAAGAGACTACTACAACGATCAGAAAATGAAGATTAAGTTGAACAAAATCATTTGATACCTTCTTTTGTTCGGCAGATTCCTATTTT
GATCAAATTATTGCAATACCCAGAATTATGTTTCAGCTAGGTTGCTTCCTTGCTTGTTCTTGAGCTGGGAACTGGTATCACAAAGTCCTACTCCATTCGT
ATAATAATCTAAGATTTTTCTAGCATTGCTAATATTCGTATAGATGTTAATGAATTAGACACATTATGAAACGGAGGGAGTAGCATTGATTTCTTACCTC
ACCTACCTGCCTCTCACTTCCTTCAGATTGTCTGGCTTTTCACTCGCGATTTGTATAGGATCAGTTTGGGATGTACACATTAAAATCGAGTAGCCTTGAA
CGCTTGTACTAACTTAATGCAAATTGGTACAGACTAGAGAGATAAAACAATTCTCTCTTAGGTTCATGTATATGCTCTATCTCCTTCCGGCGGGCCGCTA
TACCAGAGTAGTCTACCTTTGCTTGTTTGTGCACCACTGGAACTCCTTGAAGCATATTTGTTTTCTTAGGAATGAAAGGAACCAGGAAGAATGCCAAGAC
AAGATCTCTCAGCAGTGTTCTGATTGTAGTCTTTGATCTGGTGGTACACACAACTCTGCATTCGTCTAGGCCATGTGAGATTCACAAACTTGTGAGTTTT
GCGGGTACTAGCCACTAAAGCTGAATTGCTGATGATACCAAAACACATATATAGCACAGACACACAGGTCTTGGGTGTACGTACTTCACTATATGGAGCA
GATTATACCATTAATTTCTCATATCATATCATCAGTTAGGGAGCAAGTTGAAGATAATGTATCGCACATTATATAGCAGCGGACCAAATTAATACAGCCC
CACCAAAGAGTTGATCCGAATTCGACAACAGGAACCATTTGAGATCTAGAGCATACACGCTACTTGCTCGTGATTGTGTCTCGATGAATAGAAATTGACT
GGAGTATGCATTGCAAAACTCTTTTTTCTTAAGATAGGCAGGAGGATTTTTACTCAATACTGTTGAACAAAAGCATATTAATATTGGAAAGGAACAACCA
TACTAGATATGATTGAAAACAAATAAGCTGATCACTCTTTTGGCCGTATGAAGAATCCTGATTGTTTTTTCAATGTCGGCCAAATGTTGAAAGATGGTAT
GACCGTATGAGATTAAAAAAAAAAGCCAGTTCAACTAGGGCTTCAATTAAGATGGTATGAGATAAAAAAAGGCCAAATGTTTACTTCTTCCTTACATGCT
TCGTCCTAAAAAAGTCAGTTCCTAGCTATGAACATGTATATGGGCATGTCCAGGTTTAAAGCTAGAGATTGTTTTTCTTAGGACGGAGGGAGTAAGTGAC
TAATATAAGAGTTATGTTACCGTAGGCCAATAACTGAAGCAAGCAAAGGCTCACATCTCGCCCGAAATTTCGGTGTTTTGCAAATTTTTGTGAATTTGGT
CAAATTTTATTCAAATTCATTCAAAATAAGTCAAAATTTCAAATAATTTCAGCCACAAAATTTCCGAAATTTTGGTCCTCCCAGGCAAAAATACAATTTC
AAAATTGAAAACCCTGCTCACACATCACAAATTCTGGCGCAACATAATTTATGTTAACATGTTTGGGTTTGTTTCCTCATGCTACCTCCTTTAGCCTATA
TAAGGACTAATGTCTAAGCATACACTTCATGTCTGATAGGAATGTGAAGTCACTCTATTCTCAGTTGTTATATTAGTATAGTGCATTTCTTTACTTGGAA
TAGGTGGTGTCGTGGAAAGAATATCATGATATGGAGTCGTATATGCTGAGCATGCTGACCAAAATAAGGAAGAGATACCTGTAAGAATACGGATGGAACC
TGTACTGTGGTCGACTGGTGTTGCCGTTCACATAGCTCTTAAAAGTCTCCCTATGCTATGTGCTAGCAGCCTACCTCCATCTCCATCTCATTGGGCTGCT
GCCTCCTCGCGGATATGTTGCACCGCCATTGCATTACTACTTTGTCTATCGTACCTACCTCTAACGTAAGTTCAAAGGAGATAAATTTACAACTAACTCC
ATCACCACATATGCCTCTCACTTCCCTCTGATGACCTATGTTATAGCTCTCGCAGCAAAGTTCATTTGAGATGTCACACTAGGAATAGGATCTAGAGCAT
GTTGTCAATCTCGCCGTCTGTGGCGTTGTCTTTTTAGGCATTTTCTATTTTTCACTGTTCCTCATCGGGTAGTTTGTCGTTCTTTTCTTTGTTTTGCTTG
TGGGCCAGCTGGCTAGCAGCTACGTCGTGTGTAAGACTTTAGGTGTGTGAGTTCACGTCAAAATCGTGGAGTCTGTTGTGGAGTCCGAGTCTCGCACGGC
ACGATCTGACGTGTGGGATGGCGCACGTCGGTGCGGATCGTGTCGCGTGCATGATGGCCACTACGGCCGATTTACTAGCGTTGTTTCCAAATAAAAGGGG
ATGAATATAACCCAGAAAAACTGCTGAAGGTGTTGCAGCGCCAATGCACTTGTCTTCAAGTTCAGAGGCATTGTTGAGTTTTTCAGTTTGGGAGTTGAAG
AGAGATTGAGGACGCCGGGATTCTGTTCGCCGGCTAAGAGAGCATACACATTGCTTTGAGAAAATTCTCTGCGTACGTACCCTTTAAACTTTCTCTACGT
AATTCCTACCATGTCTCTGAATTTTGCTCATTCTCTTGTATATCTATGAATTTTAGT