Detailed information on CNT30695491


BLAST search results

BLAST vs Swiss-Prot:
sp|O22287|GMPP1_ARATH, E-value = 1e-168

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517135Oryza sativaJuglans regia13.2625.8480.14146forward
CNT30272082Oryza sativaChenopodium quinoa24.5212.7381.48270forward
CNT3082871Oryza sativaBrassica juncea15.6220.979.07172forward
CNT30102918Oryza sativaOryza rufipogon38.9628.62100429forward

Expression of CNT30695491

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MGLFAKSTRGFGKLSVKGRRRVPKPPTRMSAFMVNRL

>peptide 2 (29 aa)
MAHQIHPQACPLLEQEGQQFPRAQSLGNT*

>peptide 3 (45 aa)
MLLNTHATHHRATGKPHTILHDASRTNSNIRTNQTAFANLRTLVN*

>peptide 4 (50 aa)
MLFDMQACFLIRTPRITVQRESLTPSSTTHPGPIATSGPIRQPSPIFALS*

>peptide 5 (36 aa)
MVLVKFYELSKRVFTYDVTVEDKEWLTRSIHKLVPC*

>peptide 6 (68 aa)
MSSAKGYSLMTSLLRTKNGSPDPSTSLSLARARGPAVPKGSVSWEHVIVMPSLSSKSFRKLSITSGGS*

Sequence

>CNT30695491
TCACATGACAATCTCAGGTTTCAGGATGCTTGATTTGATCTCTTTGTGCGGGAGAATAACACCGCCGTTGGTATAGACCTCATCACCTACATGTACGTCC
TCTCCTAGGATAGTCATATTTTCTATCCGTGCCCATTGTCCAACAGTTGAGTGCCATCCAATAATGCTGTTTGATATGCAAGCATGCTTCTTAATACGCA
CGCCACGCATCACCGTGCAACGGGAAAGCCTCACACCATCCTCCACGACGCATCCAGGACCAATAGCAACATCAGGACCAATCAGACAGCCTTCGCCAAT
CTTCGCACTCTCGTGAACTAGCACATTCCCAACAATGTGTGCTCCAGTGGCTAACCTGTTGGCTGATCTCTTCCTAAGTGAATCCAGATAAAGGCGCAAG
CCTGTAATGTAATCCCTTGGTTGGCCAACATCCATCCAAAAACCTGGAAGGACCATAGCAAAGAGCTTTGCATCAGCTGAGATTCGAGGAAAGACCTCTT
TCTCAATTGAAGTTGGCTTTAGCTCGATGCGGTCCAGGACAGACGGGTTCAACAAGTAAATTCCTGCATTGATCTTGTTGCCTACAAATATTTTTGGTTT
CTCAACAAATTTTTCCACCATTCCAGTGGCCTCCTCCATAACCACAACACCATATTTTGATGGTTCGATCTACCTTGGTGACCATAATTGTTGCCTCACC
ACCATGGTTCTTGTGAAATTTTATGAGCTCAGCAAAAGGGTATTCACTTATGACGTCACTGTTGAGGACAAAGAATGGCTCACCAGATCCATCCACAAGC
TTGTCCCTTGCTAGAGCAAGAGGGCCAGCAGTTCCCAAGGGCTCAGTCTCTTGGGAACACGTGATTGTGATGCCAAGCTTATCCTCAAAGTCCTTCAGGA
AATTGAGCATTACCTCGGGCGGTAGTTGATGGCTAAAACAACTTCTGTTACTCCAACTTCTTTCAAGGCCTCAATCTGATGCAGAATCATGGGCTTGTTC
GCGAAATCAACAAGAGGCTTTGGGAAACTGAGCGTTAAAGGCCGAAGGCGAGTGCCGAAGCCTCCAACCAGAATGAGCGCCTTCATGGTGAATCGCCTCC
T