Detailed information on CNT30695258


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370892Oryza sativaOryza glumipatula68.3118.1399.34304reverse complement
CNT30102897Oryza sativaOryza rufipogon93.71100100417forward
CNT30575482Oryza sativaOryza barthii68.3131.496.71304reverse complement

Expression of CNT30695258

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MSLRRHHLAVKWEDGHLCICYLTLYVMGLLYSCYALSGQFILWSVAVLFLSERLSIQSIVWSLNYCMGAYYLFYLIRDVELLNCCIG

>peptide 2 (65 aa)
MGRRSFMYLLFNVICNGSAVLMLCPFGAVHPLVCSSALSIRKIIYTKYCMVIKLLYGSLLSVLSY*

>peptide 3 (45 aa)
SRVSPPSLRDIPIYKRFEVKSFHWTQAHSSSGRQVPSSPGYSSLL*

Sequence

>CNT30695258
CTCGCGCGTCTCCCCTCCATCACTGAGGGACATTCCCATCTACAAAAGATTTGAAGTAAAATCTTTCCACTGGACACAAGCTCACTCTTCTTCAGGACGT
CAGGTTCCTTCATCACCCGGGTACTCTTCCCTACTGTGAAAGTACTTCTGAGGACTGAGGCCTATATAACCCTTCCTTCATCTATGAGCCTTCGAAGGCA
TCATTTGGCAGTAAAATGGGAAGACGGTCATTTATGTATTTGTTATTTAACGTTATATGTAATGGGTCTGCTGTACTCATGCTATGCCCTTTCGGGGCAG
TTCATCCTTTGGTCTGTAGCAGTGCTCTTTCTATCAGAAAGATTATCTATACAAAGTATTGTATGGTCATTAAATTATTGTATGGGAGCTTATTATCTGT
TTTATCTTATTAGAGACGTGGAATTATTAAATTGTTGTATAGGAG