Detailed information on CNT30695227


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006809, E-value = 6e-113

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102915Oryza sativaOryza rufipogon53.8981.99100173forward

Expression of CNT30695227

Peptides detected in this lncRNA

>peptide 1 (39 aa)
EIGMRSFKSLNSSKIMIYMFVYFICIVYLVFISLFPCFA*

Sequence

>CNT30695227
ATGAAATCGGAATGAGGTCGTTCAAGTCTCTAAATTCATCTAAAATCATGATCTACATGTTTGTTTACTTTATATGTATTGTTTATTTGGTTTTTATTAG
TCTTTTTCCTTGTTTTGCGTGATAGCTTGTCGTTTCCGTCGTTGCGAAGGTTCATGAGTGCGTCGGAAGTGTTCAAGAAGACTAATTGAAGACCGATTAT
TGCAAGTTGAAGACAAGTTGCGAAGGAGAAGACGTTTGGCTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCCGGAGCTTCGCTAGACCGTAATTCC
GCTGCAGTTTTCTTTTCTTTT