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Detailed information on CNT30695095

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30555356	Oryza sativa	Oryza glaberrima	54.83	22.17	98.48	329	forward
CNT30102611	Oryza sativa	Oryza rufipogon	55.5	65.94	100	333	forward
CNT30117760	Oryza sativa	Oryza nivara	54.83	42.67	97.57	329	forward

Expression of CNT30695095

Peptides detected in this lncRNA

>peptide 1 (38 aa)
EALLSFLSPFHGRLSLSSADLPHRSNTGQSLAPSSFPR*

>peptide 2 (49 aa)
MRGIHFSPFPSSSTSESNLTGALSLLPVHDLPSAVPAISLTPFAGHCHP*

>peptide 3 (52 aa)
KLSSLFSLLSMAGYHCRRPISLTGAIPDNPSRHRAFLDERNPFFPFPLFLHL*

Sequence

>CNT30695095
TGAAGCTCTCCTCTCTTTTCTCTCTCCTTTCCATGGCCGGCTATCACTGTCGTCGGCCGATCTCCCTCACCGGAGCAATACCGGACAATCCCTCGCGCCA
TCGAGCTTTCCTCGATGAGAGGAATCCATTTTTCCCCTTTCCCCTCTTCCTCCACCTCTGAATCAAACCTCACCGGAGCTCTCTCTCTCCTCCCGGTTCA
CGACCTTCCATCCGCCGTTCCGGCTATTTCCCTTACTCCCTTTGCCGGCCACTGCCATCCCTAGGTGCGTTGCAGTCGGGAACACCAGTGGCCGCCGGCG
TTACCGCCTCCTCGCCACCGGAGCCCGGCGCCCCCTCTCCTTCTCCTCTCTGTTCGACCAAGGAGAAAAAGAAGAAAGAGACGGGAAGAAGAAGAAGAGG
AGAAAAAGAAAAAGAAAAAGGAATCCCTGACAGAGTCCGTTTGATGTTCTTACTGAAGCCGGGAGTTCAATCATATAAGTTAATCTCATTTTAACTTAGT
TCTCAAGTATAGATTAGATAGATGGTTTAAGTCTATAGCAAAACACTAGAGTTGAGTCATCGTATAGCTTCTGCTGTAATAGTTAGCCACAAGCTTGTAA