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Detailed information on CNT30694940


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672277Oryza sativaSetaria viridis28.1822.7892.6882forward
CNT30520486Oryza sativaSetaria italica28.1815.5992.6882forward
CNT30221871Oryza sativaHordeum vulgare32.340.8793.6294forward
CNT30436523Oryza sativaAegilops tauschii28.1812.4191.4682forward
CNT30251998Oryza sativaAvena sativa30.9331.2587.7890forward
CNT30659005Oryza sativaTriticum dicoccoides32.333.189.3694forward
CNT30450016Oryza sativaSaccharum spontaneum28.187.4292.6882forward
CNT30680544Oryza sativaTriticum urartu32.6536.8290.5395forward
CNT30352666Oryza sativaEragrostis tef28.1810.1492.6882forward
CNT30362958Oryza sativaSorghum bicolor28.1816.6393.982forward
CNT30370761Oryza sativaOryza glumipatula49.1414.4299.3143forward
CNT30325402Oryza sativaAsparagus officinalis23.025.8486.5767reverse complement
CNT30147603Oryza sativaBrachypodium distachyon22.3421.8187.6965forward
CNT30100764Oryza sativaOryza rufipogon24.0525.9394.2970forward
CNT30496353Oryza sativaDigitaria exilis28.187.1792.6882forward

Expression of CNT30694940

Peptides detected in this lncRNA

>peptide 1 (95 aa)
AALGGDELGRLLGVPHHPGAAQPRRVEAERPEHVGVEGGSRRRLVVDGGVVVEHLAVVVLLRRSVLVHLVLPEPVVAEPRRGLDELPPLRREVLHP

>peptide 2 (96 aa)
APPLAATNWAGFSACLTIPAPPNLGELRLSALSTSASRVGVVVGLWWTGGSSSNTWRWWSSSAAASSYIWCCLNQWSRNHAVVLTSSHHSGEKSSTL

Sequence

>CNT30694940
GCGCCGCCCTTGGCGGCGACGAACTGGGCCGGCTTCTCGGCGTGCCTCACCATCCCGGCGCCGCCCAACCTCGGCGAGTTGAGGCTGAGCGCCCTGAGCA
CGTCGGCGTCGAGGGTGGGAGTCGTCGTCGGCTTGTGGTGGACGGGGGGGTCGTCGTCGAACACCTGGCGGTGGTGGTCCTCCTCCGCCGCAGCGTCCTC
GTACATCTGGTGCTGCCTGAACCAGTGGTCGCGGAACCACGCCGTGGTCTTGACGAGCTCCCACCACTCCGGCGAGAAGTCCTCCACCCTC