Detailed information on CNT30693862


BLAST search results

BLAST vs Swiss-Prot:
sp|P46518|LEA14_GOSHI, E-value = 3e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672611Oryza sativaSetaria viridis29.2915.5193.187forward
CNT30553850Oryza sativaOryza glaberrima63.320.35100188forward
CNT30131205Oryza sativaLolium perenne27.6111.4589.0282forward
CNT30351852Oryza sativaEragrostis tef35.3527.2792.38105forward
CNT30368095Oryza sativaSorghum bicolor18.8624.5687.556forward
CNT30101761Oryza sativaOryza rufipogon54.2130.21100161forward
CNT30576430Oryza sativaOryza barthii51.1829.57100152forward
CNT30116388Oryza sativaOryza nivara44.1137.43100131forward

Expression of CNT30693862

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSLSVGSFISPLVESGMVKLPTMGRSMVRPTSSWKS*

>peptide 2 (31 aa)
AIIRETHHTYREFDRSELVDEIRDKIIRTCP*

Sequence

>CNT30693862
GCCATTATTCGCGAGACACATCACACATACAGAGAGTTCGATCGATCGGAGTTGGTTGATGAGATTAGAGATAAGATAATTAGAACATGTCCTTGAGTGT
GGGGAGCTTCATCTCGCCGCTGGTGGAGAGCGGGATGGTGAAGTTGCCGACGATGGGGAGGTCGATGGTGAGGCCGACGTCGAGCTGGAAGTCGTAGGGG
ATCTTGGCCGGTATCTCCAGCTTCGTCGTGTCGCTCGCCGCGATCCACCCCGGATCGGGCATCGTGCCGGACGCCACAACGCTGATGATGACCAATC