Detailed information on CNT30693031


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555299Oryza sativaOryza glaberrima10011.3793.33345forward
CNT30108025Oryza sativaOryza longistaminata45.2213.9494.23156forward
CNT30101507Oryza sativaOryza rufipogon75.9449.4393.89262forward
CNT30578306Oryza sativaOryza barthii73.3315.7893.68253forward

Expression of CNT30693031

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSYKVNVLGYFFSNYRSACLSRCKDNGIYLFG

>peptide 2 (30 aa)
MGLICPRAELLDRAVHPGKYETLFADVFTL*

Sequence

>CNT30693031
TCATTATAGATTGTAGAAACTTTGTTTATAACAAAATATGCCTGCTTTCTGTTCGATGAAATAACTAACTGTGCTTGGCAAGCTTATAACCTATGTTTGT
GTATGGGTTTAATTTGTCCTAGAGCAGAGCTGCTGGATCGTGCAGTTCACCCTGGTAAATATGAAACTTTATTTGCAGATGTATTTACTCTATGAACATT
GTTAAAGATTTATCTCAATTATATATAACAAGCTGCTTTCAATTTTATCATGAGTTACAAGGTTAACGTGCTGGGATATTTTTTTTCAAACTACAGGTCA
GCATGTCTCAGCAGATGCAAAGACAATGGAATATATTTATTTGGT