Detailed information on CNT30692631


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30111511Oryza sativaOryza longistaminata56.4110095.87242forward
CNT30116437Oryza sativaOryza nivara85.3198.92100366forward

Expression of CNT30692631

Peptides detected in this lncRNA

>peptide 1 (31 aa)
GGQQPGCPPLSSKPPPLQCCGSMCWELENGQ*

>peptide 2 (71 aa)
MTGSAARSVASSTCSSARMGSEPERSSCLRSNGYFDLSIPYRSAIFVFGSHMPIQWLVQLNFYTKLCTNFL*

Sequence

>CNT30692631
TAGGAGGTCAACAGCCCGGTTGTCCTCCACTAAGCTCTAAGCCACCACCCCTGCAGTGCTGTGGTAGTATGTGTTGGGAGCTGGAGAACGGCCAGTGAGC
TCGGCCCCATGACCGGGAGTGCTGCAAGGAGTGTAGCGAGCTCGACTTGCAGCAGCGCGAGAATGGGCAGTGAACCCGAACGGTCCAGTTGCTTGAGGAG
CAATGGCTACTTCGATCTGAGCATCCCTTATAGATCTGCAATTTTTGTTTTTGGATCGCACATGCCCATCCAATGGCTAGTTCAACTTAATTTTTATACT
AAACTTTGTACTAATTTTCTTTAGTGCAAGTCAATTTGGCATATCTGAATTGTTTATGAGCCATCACACATATACAAAATTATCGACTAGTGCAAAATCT
GGTGATGGCTGATGAGCTCTAGCTCCTCC