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Detailed information on CNT30692535


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100880Oryza sativaOryza rufipogon60.910099.26408forward

Expression of CNT30692535

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MGREGRRESQPRRPAKLYAAIWGGAEDEVAGRRPWRLAG*

>peptide 2 (62 aa)
MEAAASEVRQGKLPPSRRQPGTATSTRPLRAPPAAAVLPPAAKLPPHRAGLLSLRPLPRWAD*

>peptide 3 (29 aa)
CDLATGPRRRRREPWRWRSGASRPSAVAA*

>peptide 4 (91 aa)
RPGDWAEATAARALAMAVGRQSAQCGSGLREPRQCQANGERRPAREPATPAGEVVCGNMGRSRRRSGWTPSMAASRLGFTVSGGERGTREW*

Sequence

>CNT30692535
TGCGACCTGGCGACTGGGCCGAGGCGACGGCGGCGCGAGCCTTGGCGATGGCGGTCGGGCGCCAGTCGGCCCAGTGCGGTAGCGGCCTGAGGGAGCCCAG
GCAGTGTCAGGCGAATGGGGAGAGAAGGCCGGCGCGAGAGCCAGCCACGCCGGCCGGCGAAGTTGTATGCGGCAATATGGGGAGGAGCAGAAGACGAAGT
GGCTGGACGCCGTCCATGGCGGCTAGCCGGCTAGGGTTCACTGTGTCCGGTGGCGAGAGGGGAACACGAGAGTGGTAGGAATGGATTGACCCGAGAGGCC
GAGACCAGAGTGAGTCCACAGTTCTGCACCTGGTTTGCCTTGCCTCTGCTCTGCTCCCTCCAAACTCCAAATTAACAGAGAGAGGCTCTCCGCTTTGCAA
ATTTTGGAGGAGATGGAGCTCCATCACCATGGAAGCAGCAGCGTCTGAGGTTAGGCAAGGCAAGCTGCCGCCCAGCCGCCGTCAGCCGGGCACGGCCACG
TCGACGCGCCCGCTCCGAGCACCGCCAGCGGCTGCTGTCCTTCCCCCTGCCGCCAAGCTCCCTCCTCACCGCGCCGGCCTTCTCTCCCTCAGGCCTCTGC
CGCGCTGGGCTGACTAGCGCCCGACCGCCGTTGCCTCGGCCCGGTCGCCAGGTCGCGCCGCCGCATCCAG