Detailed information on CNT30691937


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007239, E-value = 1e-141

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104049Oryza sativaOryza rufipogon24.4316.195.2985forward

Expression of CNT30691937

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MPVEWCSRCSFSQGLALVVFLFFRCIYVRLL*

>peptide 2 (31 aa)
MSTLSFVYPGWSWTGNLMHILLEILFGNFWA*

>peptide 3 (36 aa)
DSDPSDAPVYFEIVAEVPPAAEQEFEFGSDEGFSEE*

>peptide 4 (29 aa)
MKVSPRSRLCPCRRGCLWSGVPAAVLVKA*

>peptide 5 (29 aa)
FRPLRRSGVLRNSRRGSSSSRARVRVRVR*

Sequence

>CNT30691937
GATTCCGACCCCTCCGACGCTCCGGTGTACTTCGAAATAGTCGCCGAGGTTCCTCCAGCAGCAGAGCAAGAGTTCGAGTTCGGGTCAGATGAAGGTTTCT
CCGAGGAGTAGGCTTTGTCCGTGCCGTCGAGGATGCCTGTGGAGTGGTGTTCCCGCTGCAGTTTTAGTCAAGGCTTAGCTCTTGTTGTCTTTCTTTTCTT
CCGCTGCATTTATGTAAGACTTTTATGATGTTTGTAAGACGTGGATCTGAATGTCAACATTGTCGTTTGTGTACCCCGGCTGGTCCTGGACGGGGAATTT
AATGCACATTCTGCTTGAAATTCTATTCGGGAATTTCTGGGCGTGACA