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Detailed information on CNT30691906


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103482Oryza sativaOryza rufipogon33.7537.62100190forward

Expression of CNT30691906

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MYDQAQQYVWDLTVRLNMNSGYVKCNLPSP

>peptide 2 (44 aa)
WQEVPIAASCFSKQPPCHTCCRDKWHQLLIQSHPREPVCLQVKQ*

>peptide 3 (68 aa)
MHWMRNIMEGTYEKMCKLLADTGDMIILQSSGGNSTLYLSPGSETRKKDDQISDLCICSSVKIVQAVH*

Sequence

>CNT30691906
GTGGCAAGAGGTTCCAATAGCCGCTTCATGCTTCTCCAAACAACCTCCTTGTCACACTTGCTGTCGAGATAAATGGCACCAGCTATTGATTCAATCACAT
CCCCGAGAACCTGTTTGTTTGCAAGTAAAGCAATAGATCCAGCTTAAGCTATTCGATGGAAAATATTACAGAAGTGCACAAAAATAGAAAGAAGCATGCA
CTGGATGCGGAACATTATGGAAGGAACATATGAGAAGATGTGCAAATTATTGGCGGACACTGGTGACATGATAATTCTGCAGAGTTCAGGTGGCAACTCA
ACACTATATCTATCACCAGGTTCTGAAACAAGGAAAAAAGATGACCAAATCAGTGATTTATGCATATGTAGCTCTGTAAAGATAGTACAGGCAGTACATT
AGTTGGACCATTGTCTAAGAGTTCAGCTATAACCCACTGTAACATGCCTCATTGATAGCGATGCAAAATACACATGTATGATCAAGCCCAGCAATATGTG
TGGGATTTAACTGTCCGATTGAACATGAACTCAGGGTATGTCAAATGTAATCTTCCAAGTCCC