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Detailed information on CNT30691649


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30587177Oryza sativaMusa acuminata7.4321.0485.5169forward
CNT30603757Oryza sativaOryza punctata75.3564.190.57700forward

Expression of CNT30691649

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MEAGTCFDKVDIILMVLLNLLINKNIFISMDASATRQLQMNSSTYEHLARFA*

>peptide 2 (32 aa)
FYCMCKISMNAWFTASMANSAILTRKNSSFFN*

>peptide 3 (31 aa)
LLLYVQNQYECMVHCFHGKLSYINTKEQQFF*

Sequence

>CNT30691649
CCTTTTATTGTATGTGCAAAATCAGTATGAATGCATGGTTCACTGCTTCCATGGCAAACTCAGCTATATTAACACGAAAGAACAGCAGTTTTTTTAATTG
ATAAGAGTACAGTTTTTGGTGTGAGCCAATACTACATGGCATCTAGTTATTCTTTGCGATTGTGCTGATCTGTTACATCTACTAGTTCCAGTTACTTCAG
CTCCACTCCCAAAATGTTGCTCTAAATTCGATCTACTGCTTTATGACAGATTCATGCAAGGGGATGGTGACAAGCTTGTGGCAGCAACTGCACATCTTGC
AAGAAAATCTTTAGGGTTTTTCAGACCATACCGATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAAAACTATCAA
GTGAGAAAGCAGGGTAGAGTTATTCAATTACAGGCACACAAGACAAAATTAAAGTAATAAACATGTCTGACCAACAAACACAATGATTAATAACAAAACT
CTTGTGGCATGAGATAATATTGAAGCATGATGCTTACAACAGTTATAATATGAAAACTAGATGGAGGCAGGTACATGTTTTGACAAGGTTGACATTATCT
TAATGGTTCTTCTAAATCTTTTGATTAACAAAAATATATTTATTTCCATGGATGCTAGTGCCACCAGGCAATTGCAAATGAACTCATCAACATATGAACA
TCTAGCAAGGTTTGCATGAATTTCTCTAGGAATGCCCAGTGAGTGATCCTGTAAATTTTGGAGTTGATTGTTCATCAGAATAGCACTATAATTTTCCTGT
CACCTGTGCTTTGGTAGCGGAACGTTCATTGTCCCATGCTACTCAGCTTTGTACTTTTGTAAATCAAATGAGACTGAATAATATATGTTTACTTTTGGAA
GGAAAAAGATGTGTATGACTGTTCTCAAG