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Detailed information on CNT30691414


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369630Oryza sativaOryza glumipatula53.6451.8999.5398reverse complement

Expression of CNT30691414

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MEQRKQSLKVVHKCEGIRAKWRRNLAFVIT*

>peptide 2 (65 aa)
KCNIHCSHVIVECLVSITAEIIHSWIPKFALFDYLGLHIFFSRICRVACVAFTSSMSRPHGGSFQ*

>peptide 3 (39 aa)
MLVLIPFRTEDIMEEAQIHMTITTTFFSAFLFIFWPEPM*

>peptide 4 (30 aa)
MYLPIEFADMYRKCHCFHLINEINISCGVPF

Sequence

>CNT30691414
AAGTGCAACATACATTGCTCTCATGTGATTGTTGAATGTTTGGTAAGCATTACTGCTGAAATAATACATAGCTGGATTCCAAAATTTGCACTGTTTGATT
ATCTTGGCCTGCATATTTTTTTTAGCAGAATTTGTAGAGTAGCGTGTGTTGCGTTCACTAGCTCCATGTCTCGGCCTCATGGGGGAAGTTTTCAATAGAT
TTGCTCTGCCAAGTTCAGAGTAGAACTGTAGAAGATTGTCTTGTGCGATGGAGCAGAGAAAACAATCATTGAAAGTAGTTCATAAGTGTGAGGGCATTAG
GGCAAAGTGGCGAAGGAATTTGGCTTTTGTGATCACATGAGGCTGCTCTTATAATCTGCAAACCTGTCAATCTAATATGCAAATGCAGTTTAATTAGTGA
CAGACTGTTCATCCTTTTGCAGCTCCATTGTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGA
GGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCC
TTGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTTGCAGATATGTATAGAAAGTGCCATTGTTTTC
ATCTGATAAACGAGATCAATATATCATGTGGTGTTCCGTTTT