Detailed information on CNT30691121


BLAST search results

BLAST vs Swiss-Prot:
sp|B6TVL4|CAS_MAIZE, E-value = 1e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30666747Oryza sativaTriticum dicoccoides36.1623.2286.7398forward
CNT30689632Oryza sativaTriticum urartu36.1620.2186.7398forward
CNT30595766Oryza sativaOryza meridionalis102.2197.5495.67277forward
CNT30100064Oryza sativaOryza rufipogon98.8997.45100268forward

Expression of CNT30691121

Peptides detected in this lncRNA

>peptide 1 (89 aa)
RDRDELVLRVRGELWHAGFGLVLLGPHIDQHVILRGHHVQSLCSGQVREERRSGDHDVVRGAQRPDGLHRRRRDGLRGVDDLRALLRRVR

>peptide 2 (31 aa)
GIEMSLFFAFEGSCGTPVLALSFSVLTSIST*

Sequence

>CNT30691121
CGGGATAGAGATGAGCTTGTTCTTCGCGTTCGAGGGGAGCTGTGGCACGCCGGTTTTGGCCTTGTCCTTCTCGGTCCTCACATCGATCAGCACGTAATCT
TGCGAGGTCACCATGTCCAGAGCTTGTGCAGCGGTCAGGTACGCGAGGAACGCCGCTCCGGCGACCACGACGTAGTCCGCGGAGCCCAGCGACCCGATGG
TCTCCACCGTCGCCGACGCGATGGGCTTCGCGGCGTCGATGACCTTCGTGCCCTGCTGCGCCGCGTCCGCG