Detailed information on CNT30691018


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670622Oryza sativaSetaria viridis21.5814.5686.6760forward
CNT30520004Oryza sativaSetaria italica21.5811.7686.6760forward
CNT30302147Oryza sativaTriticum aestivum34.1736.5482.1195forward
CNT30461865Oryza sativaSaccharum spontaneum34.178.7688.4295forward
CNT30584157Oryza sativaEchinochloa crusgalli21.229.7289.8359forward

Expression of CNT30691018

Peptides detected in this lncRNA

>peptide 1 (33 aa)
NTPSPPNISSKLELGGLRVICVGGLLAVGWLCW*

Sequence

>CNT30691018
AAAACACACCGAGCCCCCCTAACATTTCCAGCAAATTGGAACTAGGCGGGTTACGCGTTATTTGCGTAGGGGGACTCCTCGCGGTTGGCTGGCTGTGCTG
GTGATCGGCTGTAGCTTCGTGCACGAGCTGGTGGTGGCGACCTGCTGTAGCTGCGCCTCTTTGGAGAACGATCCCGTTCGCCACATTCATAGCACTTCAT
GTCAGAACCACCGGAACGATCTCGGCCACGACCACTACCAGCTTTGGTTGACAGCTCAACCCTCCATCCATTCTTGCC