« Back to Oryza sativa search


Detailed information on CNT30690940


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002745, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30109981Oryza sativaOryza longistaminata66.6257.7397.97493reverse complement

Expression of CNT30690940

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MKGWIYFIFKPKKSKDSSSLPGRCEYPLSITGKPSKRDQRFSRIMNKDPNCTPMATHGS*

Sequence

>CNT30690940
CTAGTAAAACATACGCATGATTTATGCATTAAGAAACCAACATGAAGGGTTGGATTTACTTTATTTTTAAACCAAAGAAGTCAAAAGATAGTAGTTCCCT
CCCGGGCAGGTGTGAATATCCTCTTAGCATTACCGGTAAGCCGAGCAAGCGTGATCAGCGCTTCTCAAGGATCATGAATAAAGATCCAAATTGCACTCCC
ATGGCTACGCATGGTTCTTGAATAATGTAAACAGAACATTCGGAATAATGAAACATGAATAACGTCATGAATTTGAATATGGGTCGAAACACGAATAAGT
AGCATAACGTCATAGCCATACAATCAGTAATAACAAGCAATTGAATAATAATTATGCAAGTAAAGCCAAACAAAACAACTCAGTTTTGTCCATCACATAA
GTCCGTCTTGTACTTGCCTTAACTAATTCGATACTCCGACTCAACTCCTCCAACGTTGGAACCCTCCACACCTGTGGAGCAAAACTACGGATAAACCACT
ATATTCAACTAACGATGGTTACAAGGGATATTTACTAAAATCGAAACCTAGAACATATAAACCTTTTACCGATTTGTATTAAATAACCTATAGCTGTTCC
ATTACTGTTTTATGAGTAACTCACAAACCGTCTAACGGAAACTAGCAAATAATACAACTTCGGACATCTAGACAAAATTGTCTACAACTTTCATGTTGAG
CACAAAATCAGATTATGCCTCTGAAAATCCCAGATTAAGG