Detailed information on CNT30690889


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006409, E-value = 5e-40

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577507Oryza sativaOryza barthii61.0421.4186.17282reverse complement

Expression of CNT30690889

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVSLFFSSVCSINLDLHYVHKNYYVIIGCNSFE*

>peptide 2 (94 aa)
NNSMVVTSEAAQLERMVPEQAGKGASVTSPQRRLPDGSMGHRRNESRRPSILSCVVEVIFRVTYWLRFWAQLQRCDEDEELLKVACQKLETTVI*

>peptide 3 (29 aa)
MVGDLQIDFNNCDLLTLDGFFVFLFSVFY*

Sequence

>CNT30690889
CAATAACTCGATGGTGGTGACAAGCGAAGCGGCACAGCTCGAACGGATGGTGCCAGAGCAAGCGGGAAAAGGCGCCTCCGTCACCTCCCCTCAGCGGCGC
CTCCCCGACGGCTCGATGGGACATCGACGGAACGAGTCGCGGCGGCCTTCCATCCTCTCCTGTGTGGTGGAGGTCATTTTCAGGGTAACTTATTGGCTCC
GGTTTTGGGCACAACTACAAAGATGTGATGAAGATGAAGAGTTGCTGAAAGTTGCATGCCAAAAGTTGGAGACTACGGTTATCTAATTTTTTACCAATTA
TGGTTGGAGATTTACAAATAGACTTCAATAATTGTGATCTCCTTACGTTAGATGGTTTCTTTGTTTTTCTCTTCAGTGTGTTCTATTAATTTAGATTTAC
ACTATGTTCATAAAAACTACTATGTAATAATTGGCTGTAACTCTTTTGAGTAAATACCGGGA