Detailed information on CNT30690521


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30106115Oryza sativaOryza longistaminata74.4837.9193.82356forward

Expression of CNT30690521

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSLSRLIYTRAFACGVLWNSLEFISCSFSS*

>peptide 2 (45 aa)
TSSSSLSLSLPCPTISTTGRSPSPEVRKTNPRAANSASSRQYNKF*

>peptide 3 (72 aa)
PPQALSLFLSHVRPLVPPADLPHRRFARQTLAPPTPPRRDSTTNSSGIQGVDMDPDGYAEAAENLKAQEETC*

>peptide 4 (29 aa)
MATLKQRKILRHKRKHANKIRRKQGLRQR*

Sequence

>CNT30690521
ACCTCCTCAAGCTCTCTCTCTCTTTCTCTCCCATGTCCGACCATTAGTACCACCGGCCGATCTCCCTCACCGGAGGTTCGCAAGACAAACCCTCGCGCCG
CCAACTCCGCCTCGTCGAGACAGTACAACAAATTCTAGCGGCATCCAAGGAGTTGACATGGACCCAGATGGCTACGCTGAAGCAGCGGAAAATCTTAAGG
CACAAGAGGAAACATGCTAACAAGATCAGAAGGAAGCAAGGTCTACGACAACGATGAGTTTATCTAGGCTAATCTACACTCGAGCTTTTGCCTGTGGAGT
CCTTTGGAATTCTTTGGAGTTTATTAGTTGTAGTTTTAGTAGTTGAAGAGTTTAGGAGTGTAGTACTTTGGATTTTCTTGTATTTCAAATAAGGATATAT
TAATTTGGATCTTTTCACCCTTTAACAGTTGTATAATTAGCTTGTATGAACAAACCTGTGTAAATAATCGAAAGCCGT