Detailed information on CNT30689774


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 7e-152

BLAST vs NONCODE:
NONMEST001181, E-value = 8e-130

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30722025Triticum urartuTriticum spelta86.5289.8495.23796forward

Expression of CNT30689774

Peptides detected in this lncRNA

>peptide 1 (73 aa)
EGLGTAEVQTAKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 2 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 3 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 5 (34 aa)
RRFRNCRSTNSKKTGTRSGLIYSFKFIQICCSTA*

>peptide 6 (33 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVL

Sequence

>CNT30689774
CGAAGGTTTAGGAACTGCAGAAGTACAAACAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAG
CATAAAGTTCAGACACAGCCAGATATAACGCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTAC
ACAGAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGAC
TCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCT
GGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATACCACCCCT
GAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGC
TGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGG
TCTTGACAAAGATCTGCATACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAG
CTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACC
TCAAGGGTGATGGTCTTGCC