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Detailed information on CNT30688990


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 2e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089926Triticum urartuSolanum tuberosum21.813.8897.07307reverse complement

Expression of CNT30688990

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MTRERKCPGTIAVRSTPCNDFDQRTSLSNTLRHDLRSSYPMIFNDTRRHLIIHTSQYAFFLFFGL*

>peptide 2 (56 aa)
LYRSSKTSFRLRDSGISSFNTYIDEGVDDLSEEWSCARGRTFGVRPQQGGVQFKCK*

>peptide 3 (53 aa)
MRLTSQTNTGEQVEYTRARRENHVEGTRQNDPVTSGEGVLSYLLIRKAAHTRG*

>peptide 4 (41 aa)
MVLCSWVLYGGTSLWGPRGLLKKSCFDEKSVAMMASQGGAL*

Sequence

>CNT30688990
TTATATAGGAGTTCAAAAACCTCATTTCGTTTGAGAGATAGTGGAATTTCTTCTTTCAACACGTACATCGACGAGGGTGTCGATGACTTGAGTGAGGAAT
GGTCATGTGCTAGAGGCCGTACCTTTGGAGTAAGACCTCAACAAGGGGGTGTGCAGTTTAAATGTAAATGACGAGCATGGAGAGGCCAAGGTCATTTGTA
ATTAGGTGTGGCTGATGCAAGAAGACTGGCGAGCTGTCCATGGTGAGAAAAGTTGTGATGCTACTGCAGGGGGCATCCTGGTGTAGTTGAGGGCGCAGAA
CTTCTGTGCGGGTACAACTGGCACTTAAAAGACCTTCCGTGTAGATGAGTTCTCTTGAGTGAGACTAATCGAGTTACGAAGAAACCTTTGCGATGGTGCT
GTGCAGTTGGGTTCTCTATGGAGGAACTTCGTTGTGGGGACCAAGGGGTCTTCTTAAGAAGAGTTGCTTTGATGAAAAGAGTGTAGCCATGATGGCAAGT
CAAGGTGGGGCCCTGTGAAGGCAAGCCTTGTGTATGTTGGCGTGATGACGAGAGAAAGGAAATGCCCAGGAACAATAGCTGTCCGTAGCACACCCTGCAA
TGACTTCGACCAGCGGACCAGCCTATCCAATACCCTACGCCATGACCTTAGAAGTTCGTACCCCATGATATTCAATGACACCCGTAGACATTTGATCATT
CATACCTCACAGTACGCTTTCTTTCTTTTTTTTGGACTTTGAATTCCAAGCGAAGGAAGCTCAGTGAAAGATAGACTGGGATTTGACAGCAAGAAGAAAG
CAATCATAGTACGCGGCACACACCGCTGACGAATGAGATTGACGTCCCAAACCAACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCA
TGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTG
TTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTT
GAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGAC
TGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATA
GCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCT
AACCGCCA