Detailed information on CNT30688653


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ZCR3|GL812_ORYSJ, E-value = 3e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226106Triticum urartuHordeum vulgare61.2741.1291.79280forward
CNT30239963Triticum urartuAvena sativa50.1133.8390.39229forward
CNT30130807Triticum urartuLolium perenne53.8329.5790.24246forward

Expression of CNT30688653

Peptides detected in this lncRNA

>peptide 1 (35 aa)
ENSQLATMHASYCMSFILLHDGSIYHYILTSHMPR*

Sequence

>CNT30688653
TGAAAATTCACAGCTCGCAACCATGCATGCATCATATTGCATGTCATTTATTCTACTCCATGATGGGAGTATATATCATTACATATTAACTTCTCATATG
CCTAGATAAAAGAGAATATTTAGTAGTTGGTGTTCCCCCAGAACTGAGATTGGAGCCAGTGAATGAGATCCTTCTCCACCTGAAATGCCGTGGCTAAGAC
ATCATCCGAAATCGGTGGCTTTGATCCAAACACTGCATTGGCAATAGAAATAACTCCAGGGTTTTGGCTGCTGAGCGAGGACAACGCGGCTGCTGGCTTG
TCATGCGCTAGGTTCATTTGGAAGTGGATCATTGCTTTTGGGAATACGAATACATCGCCGGGGAAATTTATGACATTGATGTTGGTGACGTTAGACCTGA
CCTTGCTGGCCTTAGTATCCCTAGGCTGATCGAGCATGGCTGCGTTGAAGAAGTCTT