Detailed information on CNT30688618


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FLD5|ASD_ARATH, E-value = 3e-127

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697713Triticum urartuOryza sativa10.528.7484.54194forward
CNT30535687Triticum urartuEucalyptus grandis10.8256.3481.5200forward
CNT30306482Triticum urartuTriticum aestivum4.9230.9596.791reverse complement
CNT30400445Triticum urartuTriticum turgidum14.34103.5292.08265forward
CNT30451727Triticum urartuSaccharum spontaneum5.9522.6885.45110forward
CNT30139995Triticum urartuLolium perenne15.8560.5487.71293forward
CNT30229144Triticum urartuAnanas comosus8.3952.989.68155forward
CNT30362011Triticum urartuSorghum bicolor10.3430.6187.43191forward

Expression of CNT30688618

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQQHYKCEKKEILFHLKGELFFSHQTLHFCFVREH*

>peptide 2 (35 aa)
MRSSMTDSFSSGCMASVSKVAGCSKGTWLQTLLLW*

>peptide 3 (66 aa)
MAPDAFALVGVPAAASIVGEEAALAVLHSDSTALTEYERKVGVNDKVAVPSMEDDPVEAPLILAGV*

>peptide 4 (56 aa)
MTLALDCLFEAYHQMVVPQKSSVTSSWSSTETRRFLLSLPSSALSLRARRAQASLR*

>peptide 5 (42 aa)
MSLHLSPCLISPLAASGALSFSLSSSLPFFTSVSSISLAFFA*

>peptide 6 (37 aa)
MCLSILPRRISAGSSFSLWLVVKMMIPHLCKQTTARR*

>peptide 7 (82 aa)
MKLSRPESVTLVASSFSGSIGSLGLSSLSESLSLEAFLSLRRFPVKSTEQSMSSMTMMDLPVVSMKSFRNSVLFLTAVSSRS*

Sequence

>CNT30688618
ATTGGGTTGGTGAAATGGTAATGAAGCCTGCATGATACCATGTTTATTTTTTAATTCCATGAAAAAAACTTGTTAGCCTTTTGCTGTAGGTAAGGCGTGT
GATTCTTGTTGCAGTAGCTTTTTGTATTGTTGCATACTTTATATGCAGCAGCATTACAAGTGTGAGAAGAAAGAAATATTGTTTCACTTGAAAGGTGAAT
TATTTTTCTCTCACCAAACACTGCATTTTTGTTTTGTAAGGGAGCACTAGTGAACAAGCTCATTCTTTTTCCTTGGCTTCCTGGAGTGATGTCACTTCAC
TTGTCACCTTGCTTAATATCCCCATTGGCTGCCTCGGGTGCTTTATCCTTCTCTTTGTCTTCCTCCTTGCCTTTCTTCACCTCTGTCTCCTCTATCTCCT
TGGCTTTCTTCGCTTGAGCCTCGTCTGCCTCCTTCACCTTGGCCGCCGCCGCTTCCTCCTTGGCCTGCTTGAGCGCCTCGATTAGGCCTATCAAGCACAC
ATTCGGGTCCCTCTTTTTCTTCTTCGACATGGGCATCAGGTTCTCTGCAACGTCAGCGGGCGACATGTCGGTCTCCTCAAGCAGGCGCTGAACTTCCCCA
AACAGCTCGTGCTCAATGACATCTAGGTAGTTCTTGGCGAGCACCTTGAAGCCCTCAAAGCGGCAGTAGGACATCTCGATGTGCTTGTCCATCCTGCCCC
GCCGGATCAGCGCCGGGTCCAGCTTCTCCTTGTGGTTGGTGGTGAAGATGATGATCCCTCACCTCTGCAAGCAGACCACAGCCCGTAGATGAAGTTAAGC
AGGCCCGAGAGCGTCACCTTGGTGGCATCGTCCTTCTCTGGCTCTATCGGTAGCTTGGGCTTGTCATCGTTGTCGGAGTCCTTGTCGCTTGAGGCCTTCT
TGTCCTTGCGGCGTTTTCCTGTGAAGTCGACGGAGCAGTCGATGTCCTCTATGACGATGATGGACTTGCCCGTTGTCTCGATGAAGAGCTTCCGCAACTC
GGTGTTGTTCTTGACCGCCGTGAGCTCGAGGTCGTAGATGTCATAGTCGAGGAAGTTGGCCATGGCGGCAATCATGGTAGACTTGCCAGTGCCGGGCGGT
CCGTAAAGCTGGTACCCGCGCTTCCACGCCTTGCCGACCTTGGCATAGTATTCCTTGCTCTCCTGGAAGGCCATGAGGTCGTCGATGACAGATTCCTTCT
CATCGGGGTGCATGGCGAGCGTGTCAAAGGTGGCGGGGTGCTCGAAGGGGACATGGCTCCAGACGCTTTTGCTCTGGTAGGGGTTCCAGCTGCCGCTAGC
ATTGTTGGTGAAGAGGCGGCGTTGGCGGTTCTTCACAGTGACAGCACGGCCCTCACCGAGTACGAAAGGAAGGTAGGAGTCAACGACAAGGTCGCGGTGC
CGTCGATGGAAGATGACCCGGTAGAAGCGCCTCTCATCCTGGCCGGGGTATAAATGGATGACGTTGGCCTTGGATTGCCTCTTTGAGGCGTACCACCAGA
TGGTGGTCCCGCAGAAGTCGTCAGTGACCTCCTCGTGGTCGTCCACGGAGACCCGGAGGTTCTTACTGTCCTTGCCGAGCTCGGCCTTGAGCTTGCGTGC
GCGGCGGGCGCAGGCGTCGCTGAGGTAGGCCTCGACGGCGAGGAAGAAGTCGCTGCGCTGGAAGCGCTCGGCGCCATACTCGGAGATGGTGATCTGGAGG
TAGGGGTTGAAGCAGGCGGCGAGTTTGGCGGCCCAGGTGGTGAGGTAGAGGCGGAAGGTCGGGGGCACGTAGTTCTGCACCACGGACAGAGGAAGATGAC
GGTCGCCACCCCCGATCCAAGCCCCGCCCACTTCTCCACCACTGCCGC