Detailed information on CNT30688313


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Triticum urartuSecale cereale17.1175.5995.65161forward
CNT30305219Triticum urartuTriticum aestivum65.0447.797.71612forward
CNT30226134Triticum urartuHordeum vulgare33.3726.5991.08314forward
CNT30398990Triticum urartuTriticum turgidum40.0688.0897.35377forward
CNT30443837Triticum urartuAegilops tauschii46.5540.6797.72438forward
CNT30668156Triticum urartuTriticum dicoccoides65.0444.1997.71612forward
CNT30459409Triticum urartuSaccharum spontaneum15.0940.1185.92142forward

Expression of CNT30688313

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MARLGAEGLARSRWIVGAAISLATLRGFVKVDGEPLQGDVVAY

>peptide 2 (56 aa)
LSLSPLASAFPPTFPSPKNQFHAPAARNLQFSIIVLLFQPPPWNPRPSADPSPAAF*

>peptide 3 (39 aa)
MALMGRCLRGADGEVETSWNPCSQAEAKLAICHCSCESA*

>peptide 4 (33 aa)
MGRLRPRGIHVLRRRLSWRFVTAVVNQHKRWHA*

>peptide 5 (33 aa)
FPSPLSPPPSLRLFPRRKTNSMLQQHATSNSPL*

>peptide 6 (79 aa)
FPLPSRLRLPSDFSLAEKPIPCSSSTQPPILHYSIAVPAASMESAAVCRSFTSRLLGPPRLPQPGMLGLGRVWPPAPRV*

>peptide 7 (71 aa)
MVVSTGRTIMCLREPPSDAPCEVMLTFSFLFGSSIPLFPYAAAPSSTAMLRWWRLAGSSLNGVDGEVSSRC*

>peptide 8 (40 aa)
MGHHNRDFLASCAVAVSSLLTPFARPQCEIGNLVRTCFQM*

Sequence

>CNT30688313
CTTTCCCTCTCCCCTCTCGCCTCCGCCTTCCCTCCGACTTTTCCCTCGCCGAAAAACCAATTCCATGCTCCAGCAGCACGCAACCTCCAATTCTCCATTA
TAGTATTGCTGTTCCAGCCGCCTCCATGGAATCCGCGGCCGTCTGCAGATCCTTCACCAGCCGCCTTTTAGGTCCGCCTCGCCTCCCGCAGCCGGGAATG
CTTGGTCTCGGGCGCGTCTGGCCGCCTGCGCCGAGGGTTTGAGTTATTGCATGTGGTGGCACCAAGCATGAGGCGACAACTGCATTACTTGCAAGGAAGT
TACAAAATATATGGGTCATCATAATCGTGACTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAAGCTTGCTGACTCCGTTTGCCAGACCGCAATGCGAAATA
GGAAATTTAGTCAGAACTTGTTTCCAGATGTAAAACTTTAATCGGATATCTCTATACTTAAAAGAGTACTAGTGGATTAAGGATACAAGAGTGCATCCTA
AGTTGCAATGGTTGTATCCACGGGAAGAACAATTATGTGTCTACGAGAACCTCCAAGTGATGCACCATGTGAAGTCATGTTGACATTTTCTTTTCTCTTT
GGTTCTTCCATTCCTCTGTTTCCATATGCCGCTGCACCATCATCCACTGCCATGCTGAGGTGGTGGAGATTAGCAGGCAGCAGTCTTAATGGCGTTGATG
GGGAGGTGTCTTCGCGGTGCTGATGGGGAGGTTGAGACCTCGTGGAATCCATGTTCTCAGGCGGAGGCTAAGTTGGCGATTTGTCACTGCAGTTGTGAAT
CAGCATAAGAGATGGCACGCTTAGGTGCCGAGGGCCTCGCTAGATCCAGATGGATTGTAGGAGCCGCAATCTCGCTCGCCACTCTGCGGGGGTTTGTCAA
GGTTGATGGCGAGCCTCTACAGGGTGATGTAGTGGCTTATT