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Detailed information on CNT30688194


BLAST search results

BLAST vs Swiss-Prot:
sp|Q37550|ATP9_MALDO, E-value = 8e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221525Triticum urartuHordeum vulgare94.0996.5597.78812forward

Expression of CNT30688194

Peptides detected in this lncRNA

>peptide 1 (50 aa)
GRPIYGPREQDMTFFTSVTTFSHFFFDLMTFYAIGKRMRSERPSLGQTMQ*

>peptide 2 (49 aa)
MIRSTWACTSIIFKYWVMRTTNLIHIITICKVCHILKKMSCGLKIIRYR*

>peptide 3 (33 aa)
MARKSIFNNYVQKVQNSLLGFSWREKPSSYICE*

>peptide 4 (34 aa)
MCKKSKIAYWGSVGEKSLLPTSASKGQPFLLIHR*

Sequence

>CNT30688194
TAGGACGCCCCATCTATGGACCAAGAGAACAAGATATGACTTTTTTTACATCTGTAACTACATTCTCACATTTCTTTTTTGATCTCATGACTTTTTATGC
GATCGGAAAACGAATGAGATCAGAAAGGCCATCATTGGGGCAAACAATGCAATAGCTTCGGTGAGAGCAAAGCCCAAAATGGCATAACCAAATGATTGTT
TAGCCAATGATGGATTTCGCGCCACGGAATGAATCAAAGAACTGAGGACGTTTCCAATACCGACAGCAGCTCCGGCTAAAGCAATTGTAGCAGCTCCGGC
ACCTATTGATTTAGCACCTTCTAACATCTCGAGTCGAGAAAACACTTTTCTTGTCACGTTTTTCCTTCGCTGTTCTTTCTTGGATTTCTTGTTGATGATT
CGAAGTACTTGGGCCTGCACCTCCATAATTTTCAAATATTGGGTTATGCGGACCACTAATTTGATACATATTATCACAATTTGCAAGGTTTGTCACATAT
TAAAGAAAATGAGCTGTGGATTGAAAATCATCAGGTATAGGTAATCATCAGGTATAGGTATAGGTAGGGGGTCCTCAACCCTTGTGGGGCTGGGTGGGGT
ATCCTGAACTACTAGAGCAGCTCCCCCTTGTGGCTGGGGTAGACTCTCAGCAGCTTGGTTTATGCATGGCACGAAAATCTATCTTTAATAATTATGTGCA
AAAAGTCCAAAATAGCCTATTGGGGTTCAGTTGGCGAGAAAAGCCTTCTTCCTACATCTGCGAGTAAGGGGCAACCTTTTTTATTAATTCACAGGTAAGG
CAAAGTGCTTTCTTTTAAAGAAGCATCTGGTTCCATCTTTCTTTCGTTAGTTAAGCCACCTTT