Detailed information on CNT30686795


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671212Triticum urartuSetaria viridis62.525.5591.35185forward
CNT30371825Triticum urartuArabidopsis thaliana89.1961.6878.79264forward
CNT30176931Triticum urartuSecale cereale41.2225.7481.97122forward
CNT3011502Triticum urartuZea mays40.220.3881.51119forward
CNT30359398Triticum urartuLactuca sativa20.2711.289060forward
CNT30370323Triticum urartuOryza glumipatula30.0719.8283.1589forward
CNT30604156Triticum urartuOryza punctata60.8131.9780180forward
CNT30557143Triticum urartuPanicum hallii41.2216.3581.97122forward

Expression of CNT30686795

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MRISTLASRDSITPILDETLDPPTMAANGFKLNLG

>peptide 2 (53 aa)
LLSASAANLSATTTSVGSKSLTPLDFAVSISEVASSSLSSSTRDFPTGNPWAL*

Sequence

>CNT30686795
TTGCTTTCAGCATCTGCTGCAAACTTGTCAGCCACAACAACATCGGTCGGTAGCAAGAGCTTAACACCCTTGGACTTTGCCGTTTCAATCAGTGAAGTTG
CCAGTTCAAGTTTGTCTTCCTCCACAAGGGACTTCCCAACAGGTAATCCCTGGGCCTTGTAGAATGTGAAGATCATACCACCACCAAGGATGAGGATATC
AACCTTGGCCAGCAGAGACTCGATCACACCAATCTTAGATGAGACCTTGGATCCACCAACAATGGCAGCAAATGGCTTCAAGCTGAACTTGGGGGT