Detailed information on CNT30686469


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39817|CALX_SOYBN, E-value = 9e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517641Triticum urartuJuglans regia27.2628.6285.71154forward
CNT30709122Triticum urartuGlycine max18.5829.8384.76105forward
CNT30144554Triticum urartuMedicago truncatula22.1214.684125forward
CNT30140632Triticum urartuLolium perenne29.0380.3995.12164forward
CNT30605054Triticum urartuGossypium raimondii21.0620.9986.55119forward
CNT30126269Triticum urartuCorymbia citriodora2029.8283.19113forward
CNT30120413Triticum urartuCitrus clementina21.0614.7187.39119forward
CNT30585446Triticum urartuEchinochloa crusgalli48.8591.3992.03276forward
CNT30725707Triticum urartuLupinus angustifolius24.7825.4182.86140forward
CNT3048947Triticum urartuCucumis sativus25.6610.2580145forward

Expression of CNT30686469

Peptides detected in this lncRNA

>peptide 1 (89 aa)
WNSERSSESAAAASSAFCFSFSTSNLGFQVFSKMAVATFSSSAIRMLSKRMPSCIVQISIPIAAIGSKSGLSSSKYSGLGISWGFQIPL*

>peptide 2 (43 aa)
GTQKGPLNRLLQPPQPSAFPSQHQTWASRSSPRWRWLPSHHRR*

Sequence

>CNT30686469
CTGGAACTCAGAAAGGTCCTCTGAATCGGCTGCTGCAGCCTCCTCAGCCTTCTGCTTTTCCTTCTCAACATCAAACTTGGGCTTCCAGGTCTTCTCCAAG
ATGGCGGTGGCTACCTTCTCATCATCGGCGATAAGAATGTTGTCAAAAAGGATGCCATCCTGCATTGTCCAGATCTCAATTCCAATAGCGGCAATCGGAT
CAAAGTCAGGCTTGTCAAGCTCAAAGTACTCAGGGTTGGGGATTTCTTGGGGCTTCCAGATTCCCTTGTAGGCAGGGTTCTGCTTCATTGGCCTCTTCCA
TTCACCACATCCAGGTGCCTCTTCACACTTGGGGTTGTCGATCTTCGGTGCCTCCCATTCGCCATCCTCCTCATCATCCCAGTCTTCGGGCTCATCATCC
AACCATCCTTCTGGCTTGGTGGCCTCCTCATCCAGAATTTCTGTTGGGGCATCCTCATCCCAGTCATCGGGCTTCACTGCAGCTGGGTCAGGGATTTTAG
CTCTCTCGTCCCAGTCCTCTGGCTTCTTGTCATCAGGGTCAGGAATGGTCTTTGATGGAATAAGT