Detailed information on CNT30686240


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225098Triticum urartuHordeum vulgare40.4366.9194.09186forward
CNT30396861Triticum urartuTriticum turgidum81.9651.7987.8377forward
CNT30253461Triticum urartuAvena sativa28.2615.1591.54130forward
CNT30667276Triticum urartuTriticum dicoccoides81.9670.7387.8377forward
CNT30143360Triticum urartuLolium perenne23.712.3489.91109forward
CNT30722257Triticum urartuTriticum spelta80.8710099.73372forward
CNT30149601Triticum urartuBrachypodium distachyon28.4814.691.6131forward
CNT30556342Triticum urartuPanicum hallii26.097.6285.83120forward

Expression of CNT30686240

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MLFLLLRLLLQHPGLPVLRLMLLLLLLPFPRLTAEARGDT*

>peptide 2 (80 aa)
HTLSLKSRRKSFTPHRSVVAFFPTSSSSPLHRRRETDSAMDPPPAQSMSATDDLHDKSLDGCCSCCYDCCSSILDFLCCA*

Sequence

>CNT30686240
GCCATACCTTAAGCCTTAAATCCCGGCGGAAGAGCTTTACACCGCACCGTTCCGTCGTTGCCTTCTTCCCCACATCATCATCGTCGCCCCTCCACAGACG
CCGGGAGACCGACTCGGCGATGGATCCTCCGCCCGCTCAGTCCATGTCTGCGACCGACGACCTGCACGACAAGAGCCTCGACGGATGCTGTTCTTGCTGC
TACGACTGCTGCTCCAGCATCCTGGACTTCCTGTGCTGCGCTTGATGCTGCTGCTCCTCCTCCTGCCGTTCCCACGGCTTACGGCGGAAGCGCGCGGAGA
TACCTGACTTATTTCGGAGTACTAATATAGTCATTGGGTGATATATTTTATATAGCCTGTATGTAATAAGGAGATTTATGGATCAAGTGCTGTAATGTGT
TGACTTATCTTCCGCTAAAGTAGTCGTGCAATTTGGTCTGGGAAATTTACCCAAATTCTG