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Detailed information on CNT30686114


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39817|CALX_SOYBN, E-value = 7e-76

BLAST vs NONCODE:
NONZMAT001268, E-value = 1e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676366Triticum urartuSetaria viridis36.4555.7590.83218forward
CNT30377354Triticum urartuArabidopsis thaliana27.5924.783.64165forward
CNT30278532Triticum urartuChenopodium quinoa5127.7583.28305forward
CNT30629341Triticum urartuVigna unguiculata50.3327.5680.07301forward
CNT30164689Triticum urartuPistacia vera21.9123.8287.02131forward
CNT30190468Triticum urartuSecale cereale10061.8497.66598forward
CNT30395817Triticum urartuTriticum turgidum10077.3699.5598forward
CNT30561418Triticum urartuActinidia chinensis36.1221.4380.09216forward
CNT30238817Triticum urartuBrassica oleracea21.9124.5887.02131forward
CNT30144801Triticum urartuMedicago truncatula28.0929.0782.74168forward
CNT30264134Triticum urartuBrassica rapa27.2618.884.05163forward
CNT30349705Triticum urartuEragrostis tef40.9734.9588.98245forward
CNT30366134Triticum urartuSorghum bicolor30.62991.26183forward
CNT30149228Triticum urartuBrachypodium distachyon39.4649.6888.56236forward
CNT30116414Triticum urartuOryza nivara29.7763.5787.08178forward

Expression of CNT30686114

Peptides detected in this lncRNA

>peptide 1 (43 aa)
GTQKGPLNRLLQPPQPSAFPSQHQTWASRSSPRWRWLPSHHRR*

>peptide 2 (89 aa)
WNSERSSESAAAASSAFCFSFSTSNLGFQVFSKMAVATFSSSAIRMLSKRMPSCIVQISIPIAAIGSKSGLSSSKYSGLGISWGFQIPL*

Sequence

>CNT30686114
CTGGAACTCAGAAAGGTCCTCTGAATCGGCTGCTGCAGCCTCCTCAGCCTTCTGCTTTTCCTTCTCAACATCAAACTTGGGCTTCCAGGTCTTCTCCAAG
ATGGCGGTGGCTACCTTCTCATCATCGGCGATAAGAATGTTGTCAAAAAGGATGCCATCCTGCATTGTCCAGATCTCAATTCCAATAGCGGCAATCGGAT
CAAAGTCAGGCTTGTCAAGCTCAAAGTACTCAGGGTTGGGGATTTCTTGGGGCTTCCAGATTCCCTTGTAGGCAGGGTTCTGCTTCATTGGCCTCTTCCA
TTCACCACATCCAGGTGCCTCTTCACACTTGGGGTTGTCGATCTTCGGTGCCTCCCATTCGCCATCCTCCTCATCATCCCAGTCTTCGGGCTTAGCAGCC
TCTGGGTCATCAACTTCCTCAGGCTCATCATCCAACCATCCTTCTGGCTTGGTGGCCTCCTCATCCAGAATTTCTGTTGGGGCATCCTCATCCCAGTCAT
CGGGCTTCACTGCAGCTGGGTCAGGGATTTTAGCTCTCTCGTCCCAGTCCTCTGGCTTCTTGTCATCAGGGTCAGGAATGGTCTTTGATGGAATAAGT