Detailed information on CNT30683552


BLAST search results

BLAST vs Swiss-Prot:
sp|P68527|ATP6_WHEAT, E-value = 1e-134

BLAST vs NONCODE:
NONMTRT000657, E-value = 2e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441767Triticum urartuAegilops tauschii24.3510099.27687forward
CNT30628037Triticum urartuDaucus carota15.9991.4892.46451forward
CNT30596078Triticum urartuOryza meridionalis20.4271.9195.49576forward

Expression of CNT30683552

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MAQRYDERSHRPAPRCIRLKSCTPYMCFTPQSLTFCSSICLHHIIDLTSHV*

>peptide 2 (57 aa)
MKINYWVNDKLIQWGFQKKLIRSTYNATWRGVFGPPYFVIKINKARVPSEAFAPLEM*

>peptide 3 (57 aa)
MLSLIHIIMRLLPKSNMKLKGSNEEPGNSLYPVLLYDLPNRLIRSHTLSYLKESPVS*

>peptide 4 (97 aa)
MDPRSKWNKSDGTLGLEKIIILIGMDEKKTGSLGCMTNAQIIEPHIQIQTIKKRSQTAQDYLRRIKFQSDQLVAAGEPVTDKDLVLYTLGGLGRDNH*

>peptide 5 (89 aa)
MVENSHQGEWQKTSYPRTKRAANKMKCKSPVKAMRKSSRIQDTGLTIQEKATQRVSQKNLEGNPSCSKKAFAILNAVPNTYYYEIASKK*

>peptide 6 (64 aa)
MIRIRRGAAMIPLAGNKYLSLYYLRCFSFYLNPASSRCFIDRYRAHPSHQLFHFSYAFIDGPVN*

>peptide 7 (62 aa)
MYDSTIFVISKSKACVFPVAIPYIFKRRFMSFKVGASTPSKSRFTSCGSNAGWEKLKIKEWT*

>peptide 8 (32 aa)
MDVRDALCCLCYEIEFVHLQVTPSFSALLAHF*

>peptide 9 (33 aa)
MSRLVLGTLSIINRLLYVHAVRQSIYALIHISF*

>peptide 10 (29 aa)
MGFPKKADSKHLQRYLAGSLRPSIFRYKN*

>peptide 11 (44 aa)
MHPSQELYTLHVLHATISHFLLLHLSPSYNRSHLSCLSEKNHIC*

>peptide 12 (35 aa)
NTTQYLEYPEPCSVLQKRSCSPLESSAPRFYSIMK*

>peptide 13 (39 aa)
MTSVLTGRHLDASVSRVVHLTCASRHNLSLSAPPSVSII*

Sequence

>CNT30683552
AAACACCACGCAATATCTTGAGTACCCGGAACCATGTTCAGTGCTGCAAAAGCGCAGCTGTAGCCCCCTAGAATCTTCGGCTCCTCGTTTTTATTCAATT
ATGAAATGACTCATTTTGATGGAGATTTGTAGCATCATTCAAGTAAATACAAATTGAGATCGTAGAAACATGAGCTTGTGATATAGCTACACCTAATTCC
AGACCGGTTAATGCTAGAACTATAAATAAGGGACCAAGATCTCCTATGAAATAGAAAATATTATTCAGAAATAGCATAGTCCAAGCAAACCCACTTAAAA
TCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACATATTCCTAAGCTTAATGCACGAAAACAATAAGTGATTAGCTCAAGGAGTACTAAGAA
AGGTGCTAACGGCAGTGGGACTCCCGCAGGTAATAAGAAGCTAAAAAAATGAAGCCCATGTCTTTGAAATCCAACGATCGTAATGCCTATAAAAATGGAA
AATGAAAGAGCCAAAGTAATGAGAAAATGACTTGTCACTGTGAAGCTAAAGGGTATCATACCCTGGGGATTACGAAATAACAAAAAAGTAAAAGTGACCG
AGATGCGAGGGAAAAACTTTTGTTTCACATTTCCAGAAAGACCACCTATTTGTTCGTTTACCAGGTTCAGCACGAAATCATAAATAAGCTCGACCAAGGA
TTGCCATGCATTTGGCACTGACTTTCCACCTCCCTTTTCCGTAACAACAAAAAACAGAAAAACGACCAAAACGACAGTGAGCAGCATATACAAGACTAAA
ATTGTAAATGTAAAATAAAATTTGCCCACATGAAGATCAATTATTGGGTAAATGACAAATTGATCCAATGGGGTTTCCAAAAAAAGCTGATTCGAAGCAC
TTACAACGCTACCTGGCGGGGAGTCTTCGGCCCTCCATATTTCGTTATAAAAATTAACAAAGCCCGCGTTCCAAGTGAAGCTTTCGCGCCCCTTGAAATG
TAAATCTGCGAAAGTCTCCCTTAGAGACGGGAAAGAATCCACGCCCAGAAACTGGTTACAAAACCAGGTAACATCGTATGCAGGTGGCAAAGCCAATTCT
GCCTGCTGCATGTATGACTCTACCATTTTTGTGATTTCAAAAAGCAAAGCCTGTGTATTTCCGGTCGCAATTCCATACATTTTTAAAAGGAGGTTCATGT
CTTTCAAGGTAGGTGCCTCCACCCCTTCCAAAAGCCGGTTCACAAGCTGCGGATCCAATGCAGGTTGGGAAAAATTAAAAATAAAAGAATGGACGTGAGA
GACGCTTTGTGCTGTTTGTGTTATGAAATCGAATTTGTTCATCTCCAGGTAACTCCATCTTTTTCAGCTCTGCTCGCTCACTTTTGAAAGGAAAGGAGAC
TGATCTTGACGTCGGCGTTGGTTTTTCCAACGAAACGAATATTTTTTGGATTGAGATTTCACATAAGCATTGCACAATGATCCGCATTAGGCGGGGAGCA
GCAATGATACCGCTGGCCGGGAATAAGTACCTATCCCTCTACTACTTACGATGTTTTTCGTTCTATTTAAATCCTGCGTCGAGCCGATGTTTCATTGATC
GATACCGGGCACATCCATCACATCAACTATTTCACTTTTCATACGCATTTATTGACGGACCGGTAAACTAGACCCGAAAAACTCCTATTTTTAAAATGAA
AGACCCATCACAAAATTATGGCGCAACGCTATGACGAGCGTTCTCACAGGCCGGCACCTCGATGCATCCGTCTCAAGAGTTGTACACCTTACATGTGCTT
CACGCCACAATCTCTCACTTTCTGCTCCTCCATCTGTCTCCATCATATAATCGATCTCACCTCTCATGTCTGAGTGAAAAAAACCATATTTGTTAGTATA
TATCAAGGCCGAGAGGACACGTTCCTCTCATGTCGAGATTAGTATTAGGGACCCTTAGTATTATTAACCGGTTACTATACGTACATGCAGTGAGACAATC
AATCTATGCTCTCATTCACATTTCATTCTAGCACTGACGACTCCAGCCCTATCTATCCCTAGAAGCAAATGGACCCTAGAAGCAAATGGAATAAGTCCGA
TGGAACACTCGGATTGGAAAAGATAATTATACTTATAGGCATGGATGAAAAAAAAACCGGAAGTCTTGGCTGTATGACAAATGCTCAAATAATTGAGCCG
CATATTCAGATCCAAACGATCAAGAAACGATCCCAGACTGCTCAAGATTATCTGCGCAGGATCAAATTCCAGTCTGATCAACTTGTAGCAGCAGGAGAAC
CTGTGACAGACAAAGATCTTGTCTTGTACACACTTGGTGGATTAGGCAGAGACAACCACTGATCAGATTCAGCTGACCTTAGAGGGGACCGAGATGGTGG
AGAATAGCCACCAAGGAGAGTGGCAGAAGACATCATATCCAAGGACCAAGAGAGCAGCAAATAAGATGAAATGTAAGTCACCAGTCAAAGCCATGAGGAA
GAGCTCAAGGATTCAGGACACTGGGCTGACCATCCAGGAGAAGGCGACACAGAGGGTATCACAAAAGAATCTGGAAGGTAATCCCTCTTGCTCCAAAAAA
GCTTTTGCTATCCTAAATGCTGTCCCTAATACATATTATTATGAGATTGCTTCCAAAAAGTAATATGAAACTAAAAGGATCCAATGAAGAACCGGGGAAT
AGCTTATATCCAGTCCTTCTCTATGACTTGCCGAATAGACTTATTCGCAGCCATACACTGTCTTATTTAAAAGAGTCCCCTGTCTCGTGAACGATCGAAC
TTGGTAAACTTTGAAATAATC