Detailed information on CNT30683484


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01148|NU1M_WHEAT, E-value = 4e-54

BLAST vs NONCODE:
NONATHT001124, E-value = 2e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3093646Triticum urartuSolanum tuberosum30.797.0193.79145forward
CNT30592653Triticum urartuMusa acuminata60.5111.8992.63285forward

Expression of CNT30683484

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MIEARTLSGQVPLIDHNDIVEMLHGPIYIETEKEEP*

>peptide 2 (39 aa)
SPPARSPILEIRLATLLITAERAMNPQRQTNKGRGIFGE*

Sequence

>CNT30683484
AGCCCTCCTGCCCGCAGCCCTATTCTAGAAATTAGGCTGGCTACGTTACTTATAACCGCAGAACGAGCAATGAATCCCCAACGACAAACGAACAAGGGGC
GGGGCATTTTCGGGGAGTAGCCCCCTTCAGAAGAAACTTCCTGGCACATACATTAAGGGAGCCATCGAAAGGTGACTGAAACACCTGAAACGGGGACTAC
CCGAGCTAATGATAGAGGCAAGAACACTTTCCGGCCAAGTCCCATTAATTGATCATAACGATATCGTGGAAATGCTGCACGGACCCATATATATAGAAAC
AGAAAAAGAAGAACCTTGATACTAAACCAGATCGAACAAGGGATCTTCTTGGAAATGGGAAGATCTAGGATAGGCAGCCAACCTCCTGGAAAGAGCGATG
TGCATAGACCGGGTGAGTAGGGATGCAGCTCCGTGGACCGCTCGTCGGGCCTGATAGGTGGTGGTATCACA