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Detailed information on CNT3068259


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596576Leersia perrieriOryza meridionalis15.4873.1188.39155reverse complement

Expression of CNT3068259

Peptides detected in this lncRNA

>peptide 1 (37 aa)
LIALIKLSCSYGCDKIEKISLYDYPGNSMLNRSFKRR*

>peptide 2 (73 aa)
MRGGGFHAQRDPPFLPDSVLRFSIASRDIISSPALALFLALHQTQSKWNMIVLTSSFLCRMLETKFRCRLKLD*

Sequence

>CNT3068259
TTTTAATTGCTCTGATCAAACTTAGTTGCAGTTATGGCTGTGACAAGATTGAGAAAATCAGTCTCTATGATTACCCGGGAAATTCCATGCTGAATCGCAG
CTTCAAGCGCCGCTGAGCATGCGGCAGCTTCAGCCAACAGCGCCTCCAGGACTGCCTGTATCCGGCCTGCTCCTGCCAACACACCCCTTCTTTGCTCATC
CCTGATTACAAATCCCCAAGCTCCATTCCCCCTCGTCTTCCAAAAGGCACCATCAAAATTTATCTTCAAAACACCATGAGAGGTGGCGGGTTCCACGCAC
AAAGAGACCCGCCATTCCTACCTGACAGTGTGCTCCGGTTTTCAATCGCCTCCCGGGACATCATCTCCTCCCCAGCATTGGCTTTGTTTCTTGCACTCCA
CCAAACCCAAAGTAAGTGGAATATGATTGTCCTGACCTCCTCCTTTTTGTGCAGAATGTTGGAAACAAAATTCCGATGTCGACTGAAATTGGATTAACTC
CAGCCGGTACTCCTCCAGGTATAGTTGGCACATAATTTGGATCTCGATCACATCTACGAAAATACTTGTCATTTGCACAATTCTATCGTATGAAGTTGTG
AAGGCACATGGTGGATGCAACGATCATTTCTTGCTTCTTCATTGGATAACTAGGCATTTTTAAAAGGATTCGTCATTTCATCTTCCATACACCCTTTGCA
AGGCGAGTGGATGGAGTGCGCTGCAGAGCAGGCGTGGGGCTGGATCGCCGGAACAGAGAGGATAGAGGAGTGAGGAGAGAGGAAGGCATAGAGAGATGAG
AGGGATGACATGTAGGTCCCACTAGGGGCAAATTAGACATTTTACAATGCATTCCATGCTGGCAACACTACAACATATTTGACTTCTATGATGAATTTCT
CGTGACGCTGACCATATTCGTCATTAAGTCATTATGTTTTATGACGTTTCGAATGGGGTTAATGATTAACAAGTAAAATTAATGTAATAAAGTAATGCAT
G