Detailed information on CNT30682369


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZS97|AB8I_ARATH, E-value = 8e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522911Triticum urartuSetaria italica51.429.390.22184forward
CNT30364022Triticum urartuSorghum bicolor70.9521.9587.4254forward
CNT30115765Triticum urartuOryza nivara62.2950.1187223forward
CNT30557766Triticum urartuPanicum hallii35.4713.9692.13127forward

Expression of CNT30682369

Peptides detected in this lncRNA

>peptide 1 (46 aa)
SSSLYRPAGNPWSALRSRTLQQCRPQQAPHLGTSSHMLEQYNLPNS*

>peptide 2 (95 aa)
HLRPCIGLLVILGQRYGVELSNSVVPNKLHTWVLPVICWSSTTFQIANRAPLISHNQSPLKLPGLLVIDSEVSRYLHGADRVLGHIAEGSVTEHG*

Sequence

>CNT30682369
CATCTTCGTCCCTGTATCGGCCTGCTGGTAATCCTTGGTCAGCGCTACGGAGTAGAACTCTCCAACAGTGTCGTCCCCAACAAGCTCCACACTTGGGTAC
TTCCAGTCATATGCTGGAGCAGTACAACCTTCCAAATAGCTAACCGTGCTCCTCTCATCAGCCACAATCAGAGTCCTCTCAAACTGCCCGGTCTCCTTGT
CATTGATTCTGAAGTAAGTAGATATCTCCATGGGGCAGACCGTGTCCTTGGGCACATAGCAGAAGGATCCGTCACTGAACACGGCTGAATTGAGCGCAGC
ATAGTAATTGTCACCAGGCGGCACAATACTCCCGATGTAGCGCTTGATGAGGTCCGGG