Detailed information on CNT30681751


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43261|H2B3_MAIZE, E-value = 1e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675321Triticum urartuSetaria viridis3782.2795.26232forward
CNT30379403Triticum urartuManihot esculenta18.520.6484.48116forward
CNT303693Triticum urartuZea mays49.2889.5792.23309forward
CNT30360466Triticum urartuLactuca sativa18.527.5585.34116forward
CNT30369782Triticum urartuOryza glumipatula58.8557.9388.89369forward
CNT30108786Triticum urartuOryza longistaminata40.197.4584.92252forward
CNT30100801Triticum urartuOryza rufipogon62.260.1984.36390forward
CNT3065708Triticum urartuSelaginella moellendorffii20.4136.8985.94128forward
CNT30114697Triticum urartuEutrema salsugineum20.7321.2183.85130forward

Expression of CNT30681751

Peptides detected in this lncRNA

>peptide 1 (39 aa)
KLSISSDISKGTAGLNSVVTSGLNNSTESTFSYKMTAGT*

>peptide 2 (29 aa)
MSLMKEFMMDMALEEMPMSGCTCFSTLKM*

Sequence

>CNT30681751
GCAAGCTTAGCATTTCTTCAGATATTTCCAAGGGAACAGCAGGGTTGAACAGTGTTGTTACTTCGGGTCTGAATAACAGTACCGAGAGCACGTTTTCTTA
CAAGATGACAGCCGGAACATGATCTAACTACAGGTCAACATCGATCCATCACACGCCAGAAGAGATTTGACAAAGAGCCTAAGAGGAGGTGAACTTGGTG
ACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGG
CCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTGAAGATGTAGATCTTGTACGTCTCCACGCTCTTCTTGGCCTTCTTCTTGCCCTT
CTTCTCGCCGCCGTCCTTGCCGGCGGAGGTCTTCCCCGCCGGCAGCCGCTTCTCGGCCTTGGGCTTCTTCGCCGCGGGGGCCTTCTCCGCCGCCGGCTCC
TCCTCCGCGGGCTTCTTCGCCGCCGGCTTCTTCTCCGCCTTGGGCGCCATGGACGCTGCTGCCGCCGCCGCTTCGGAGGTGAGGTGGGGGTTTCGGTGGA
CGGTGGGAGAACTGGTGGGGAATTGGG