Detailed information on CNT3068141


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696520Leersia perrieriOryza sativa36.4518.480.92152forward
CNT30555063Leersia perrieriOryza glaberrima36.4522.2980.92152forward
CNT30596955Leersia perrieriOryza meridionalis36.2121.4282.12151forward
CNT30103734Leersia perrieriOryza rufipogon36.4520.2180.92152forward
CNT30577979Leersia perrieriOryza barthii36.4519.0780.92152forward
CNT30117704Leersia perrieriOryza nivara36.4522.6580.92152forward

Expression of CNT3068141

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLLLESNPRPGRPRVHHAAQTIQTILHVHLSRHDTLQLCNMCEPKLR*

>peptide 2 (56 aa)
MQHKRSKPSFMYTSLAMIRCNFATCANQSSGETENMKLACTYSLAPACQAQAGAFEE

>peptide 3 (97 aa)
KKNHLTDMVNARQNTTTVKLRETEMNSQRFFAHSLFLVIVLLVLVVLAMPTTLLGLGIGRRALGDAPAGVQSSARTSPGSSCSTNDPNHPSCTPLSP*

Sequence

>CNT3068141
AAAAAAAAAATCACTTGACTGACATGGTAAATGCTAGGCAAAATACAACAACGGTGAAATTAAGAGAAACAGAGATGAACAGCCAACGATTCTTTGCTCA
CTCTCTTTTCTTAGTGATTGTTCTGCTAGTTCTAGTAGTTCTTGCTATGCCAACAACTTTACTGGGACTCGGCATAGGAAGGCGAGCTTTAGGTGATGCT
CCTGCTGGAGTCCAATCCTCGGCCCGGACGTCCCCGGGTTCATCATGCAGCACAAACGATCCAAACCATCCTTCATGTACACCTCTCTCGCCATGATACG
TTGCAACTTTGCAACATGTGCGAACCAAAGCTCCGGTGAGACAGAGAACATGAAGCTAGCCTGCACGTACTCTCTCGCTCCAGCTTGTCAGGCTCAGGCC
GGGGCTTTTGAGGAGCC