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Detailed information on CNT30681086


BLAST search results

BLAST vs Swiss-Prot:
sp|P27665|PSBO_WHEAT, E-value = 3e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30658229Triticum urartuTriticum dicoccoides77.1862.6199.86690forward
CNT30583886Triticum urartuEchinochloa crusgalli55.0355.0384.15492forward

Expression of CNT30681086

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MSLVFWKAGGSFFWMPSALTVKEVGSRQNFFISYLPALKGKDQLTETRRAEEARPPILAGISVAAAWRDAAMLVGGLVRGRIDPTGG*

>peptide 2 (32 aa)
MLPVDEDAFFTFSLANSSSSPLPPAGSATALS*

Sequence

>CNT30681086
ATGGGGGATCAATATCATGAGTTGGCGAGGAAGAAACAATAATAACAGAAGCTAAAATATAAACCGACACCCTGGGTTTAGATTACTAGATACACACACA
AACACATTTGTTGCCTCGATTGTTTCCTCTCCACCGATCAACCCACGTACGCATGCACACAAGATGAGTATCTTCACTTCTGCTCTGCTCTAGTTAGACT
CGAGCTGCGCGTACCACACACCCTGGATCTTGACATCCTTGGGCGCCTTGGCGCCGAGGTCGGTGTCTGACGGCTGCACGCTCTCGAAGACACCGATCAC
CTCGCCGGTCTCCGGCTTGCTCTTGGTCACGCTGAGCGTGATGTTGCCCGTGGACGAGGACGCGTTCTTCACGTTCTCCTTAGCCAACTCCTCCTCGTCT
CCTCTGCCTCCGGCGGGTAGCGCCACGGCGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGGTCGAGGAAAGACGAACCCCTGTAGCTGGGCACGA
GGAAGGGCCCGCTGAAGCTCTCGGGCTTGCCGGTAGCGACGAGCTGCTTGACGGTGAGACGGGTCATGAGCTTGGTTTTCTGGAAGGCCGGCGGCTCGTT
CTTCTGGATGCCCTCGGCCTTGACGGTGAAGGAGGTGGGCTCCAGGCAGAACTTCTTCATCTCGTACTTGCCGGCCTTGAAGGGGAAGGATCAGCTTACG
GAGACGAGGAGGGCAGAGGAGGCCCGGCCGCCGATCTTGGCCGGCATCAGCGTGGCCGCGGCTTGGAGAGACGCTGCCATGTTGGTCGGTGGCTTGGTAC
GCGGGAGGATCGATCCCACTGGTGGTTGAGAGGCGTGTTGTCAGGGCAGGCAAGTGTTATCTATGCGAGGCGCGGATAAGAGACGGCCTCCCAT