Detailed information on CNT30679789


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SLP4|CHIT1_TULSB, E-value = 1e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696315Triticum urartuOryza sativa43.0625.1283.87217forward
CNT30178063Triticum urartuSecale cereale30.3621.8697.39153forward
CNT30365536Triticum urartuSorghum bicolor60.5244.7982.62305forward
CNT30577945Triticum urartuOryza barthii36.5138.0283.15184forward

Expression of CNT30679789

Peptides detected in this lncRNA

>peptide 1 (47 aa)
ADQMKKPGSLFCLSSSLAAAMPWSGESRPSSSVVLPVCRLASTLAPG*

>peptide 2 (67 aa)
MEVVMLGKAALSRVSSRPTHSTKVSTETPAMTLTFGCAALMAATSARERLAVSQNALNTPLVGAGVGC

Sequence

>CNT30679789
GCCGACCAGATGAAGAAGCCCGGCAGCTTGTTCTGCCTTAGCAGCTCCTTGGCGGCGGCGATGCCCTGGTCCGGCGAGAGCAGGCCGAGCTCCTCCGTGG
TCTTGCCGGTCTGCAGGCTGGCGAGCACCCTGGCGCCGGGGTAGAAGCCCGTCTGGCGGTCGTAGAACATGACGTAGGTCGGGACGTCGGTGTTGGCGCC
GTAGCCGTAGAACTGGAAGTTGACGTAGTCGATGACGCCGGAGTACCTGCTCCAGAGCGCCCGGTAGTACCTCTGCACGGTGTCGTCCTCGAAGGGCGCG
ATGGAGGTGGTGATGTTGGGGAAGGCGGCCTTGAGCCGGGTGAGCAGCCGGCCGACGCACTCCACGAAGGTGTCGACGGAGACGCCGGCCATGACGCTCA
CGTTCGGGTGCGCGGCCTTGATGGCGGCCACGTCGGCGCGGGAGAGGTTGGCCGTGTCCCAGAACGCGCTGAACACGCCGTTGGTGGGCGCCGGCGTGGG
CTGC