Detailed information on CNT30679698


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618876Triticum urartuSesamum indicum20.143.5194.7457reverse complement
CNT30360275Triticum urartuLactuca sativa26.516.7890.6775reverse complement
CNT30724478Triticum urartuLupinus angustifolius22.9710.7890.7765reverse complement

Expression of CNT30679698

Peptides detected in this lncRNA

>peptide 1 (92 aa)
CLPPANSRPQPPKLPTPPAAAAMAPKADKKPAAENKVEKAAEKTPAGKKPKAGGEAKTRGRKKGSKAKKGVETYKIYIFKVLKQVHPDIGISS

>peptide 2 (93 aa)
LPPSSKLTPPTTEAPNPTRSGSHGPQGRQEAGGREQGREGGGEDPRGQEAQGRRRGEDPGPQEGQQGEEGRGDVQDLHLQGAEAGAPRHRHLLQ

>peptide 3 (82 aa)
PASLQQTHAPNHRSSQPHPQRQPWPPRQTRSRRPRTRSRRRRRRPPRARSPRPAARRRPGAARRAARRRRAWRRTRSTSSRC*

Sequence

>CNT30679698
CCTGCCTCCCTCCAGCAAACTCACGCCCCCAACCACCGAAGCTCCCAACCCCACCCGCAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGC
CGAGAACAAGGTCGAGAAGGCGGCGGAGAAGACCCCCGCGGGCAAGAAGCCCAAGGCCGGCGGCGAGGCGAAGACCCGGGGCCGCAAGAAGGGCAGCAAG
GCGAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAA