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Detailed information on CNT30679651


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 3e-48

BLAST vs NONCODE:
NONGMAT001327, E-value = 3e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375418Triticum urartuArabidopsis thaliana15.336.4486.0586forward
CNT3042757Triticum urartuPrunus dulcis45.3742.0883.14255forward
CNT30117618Triticum urartuOryza nivara39.1548.8994.09220forward

Expression of CNT30679651

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MSPEMRFTPPLRASLRIAGLVMPWMLSRSTFRWRLAPPLPSPLPPLPRPDMADGLSLVRAASECGIGGAAVVVLC

>peptide 2 (45 aa)
YIDFQLQMRVALFHDSLGTTEEVANHTSRGIIKLLGSAGEGRGSA*

Sequence

>CNT30679651
GTATATTGATTTCCAACTCCAGATGCGAGTAGCTTTGTTTCACGATTCACTTGGAACTACAGAGGAAGTAGCAAACCACACAAGTCGCGGTATCATCAAG
CTTTTGGGATCTGCAGGGGAGGGGCGAGGAAGCGCCTAGCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGGGCGTAGACGACGTCCATGGCGG
TGACGGTCTTGCGGCGGGCCGCGTAGACGACGTCCATGGCGGTGACGGTCTTGCGGCGTGCGTGCTCGGTGTAGGTGACGGCGTCGCGGATGACGTTCTC
GAGGAAGATCTTGAGCACGCCGCGGGTCTCCTCGTAGATGAGCCCCGAGATGCGCTTCACGCCGCCCCTCCGAGCGAGCCTCCGGATCGCCGGCTTGGTG
ATGCCCTGGATGTTGTCGCGCAGCACCTTCCGGTGGCGCTTGGCGCCGCCCTTGCCGAGCCCCTTGCCTCCCTTGCCGCGCCCGGACATGGCTGACGGTC
TCTCCTTGGTTCGAGCTGCGAGCGAATGTGGGATTGGAGGAGCGGCGGTGGTTGTTTTGTGC