Detailed information on CNT3067958


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30587Leersia perrieriZea mays24.4416.0382.73110forward
CNT30551453Leersia perrieriOryza brachyantha27.1121.7186.89122forward

Expression of CNT3067958

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSYLIVMFQLLEARISRCRSQGIRVVYDLFAS*

>peptide 2 (30 aa)
MLSIKVDLVASYGIDSIAHVFNIIVCNLSS*

Sequence

>CNT3067958
CTGTTGATGAAATTCTTATTGTTGTATTGTGGCTGAGGAGATGAGAAGGACAGAGAAAGCTTTGGTTTGATGTGTTTGGCCTTCTACTAAAGCCTATTTA
TACAGAGGAACCGCATGAGATAGCATCATTTTGATTGCAGACAGGTGGAATCCCTCCAGTTCATCTCCCCGGATGCTGTCTATCAAGGTAGATCTGGTAG
CATCATATGGAATCGATTCTATCGCTCATGTGTTCAATATAATAGTGTGCAACTTATCCTCCTGATGAGCTATCTCATTGTCATGTTCCAACTATTGGAA
GCAAGAATTAGCAGATGCCGATCACAGGGGATCAGGGTGGTGTATGATCTATTTGCAAGCTGAGAGTGTTGAGAAGAGAAACTCTGCTCTGGATTGATCT
TCTGAACAGATTCTCGACTCCACTCTCTAGATCAACAATGTCTAACTCCA