Detailed information on CNT30679392


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520842Triticum urartuSetaria italica27.0922.8291.82110forward

Expression of CNT30679392

Peptides detected in this lncRNA

>peptide 1 (38 aa)
PCRPPWPRGWPRSCCPAPPRLSAPPRSSWCRTASSPGP*

>peptide 2 (34 aa)
MIVHMNDSSMKCKKDAVVLDDSCMLSTVVLVGGW*

>peptide 3 (63 aa)
RAAPHGRVDGHDLAVLLRLGYQRLREVVGVGQRLRRDLELLPRRRIELGHACAMDRSHTTINS*

>peptide 4 (50 aa)
MRWCLMIHVCYLPWYLSEDGDEVVDVVAVDGADVVEPELLEERRPGAADHA

Sequence

>CNT30679392
CCGTGCCGCCCCCCATGGCCGCGTGGATGGCCACGATCTTGCTGTCCTGCTCCGCCTCGGCTATCAGCGCCTCCGCGAAGTAGTTGGTGTAGGACAGCGT
CTTCGCCGGGACCTTGAACTGCTTCCCCGTCGCCGGATCGAACTTGGCCACGCCTGCGCCATGGATCGATCACACACAACAATTAACAGCTAATTACACT
CCCCTATGTATGATAGTGCATATGAACGATTCATCCATGAAATGCAAGAAAGATGCGGTGGTGCTTGATGATTCATGTATGTTATCTACCGTGGTACTTG
TCGGAGGATGGTGATGAGGTCGTCGATGTTGTGGCCGTCGACGGGGCCGATGTAGTAGAGCCCGAGCTCCTCGAAGAGCGACGACCCGGAGCCGCTGATC
ATGCCG