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Detailed information on CNT30679240


BLAST search results

BLAST vs Swiss-Prot:
sp|Q37680|NU5M_WHEAT, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30224150Triticum urartuHordeum vulgare14.69100.4798.6215forward
CNT30655408Triticum urartuRosa chinensis40.6499.8393.11595forward
CNT30627905Triticum urartuDaucus carota83.248.5194.831218forward

Expression of CNT30679240

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MHVVVIIVVPSDPRKRPKKPAMELPSKGKKTISRYIRSSLLKKNQTMFKRPVIETKTC*

>peptide 2 (54 aa)
MTLFRSFCNIPVVAARNDVIAPAKVITIKAVGEYSNKGEHLAIMKTPAVTIVAA*

>peptide 3 (37 aa)
MGREFPSSESFYPNIKDNMWAFTERRWLIPLPTHSILP

>peptide 4 (32 aa)
MNVTTINITTVRLSNTDPKKHQTFPMISMELF*

Sequence

>CNT30679240
TACTTTGTGTAAGCGAGCTCTAAGATCACATCTTTAGAATAAAATCCTGTTAGAAAAGGAAATCCAATAAGAGATAAGCTGCCCATGAGCATCATGGCAT
AGGTCAAAGGAAAGGAGGAGGCAAGCCCCCCCATCTTCCGCATATCTTGCTCATCCGACATGGCATGAATCACCGAACCCGCACTCAGGAAGAGTAATGC
TTTGAAAAACGCGTGATTCATTAAGTGAAAGACGCTAACCGAATAGTTAGAGATGCCGCAAGAAAGATCATATAGCCTAATTGACTGCAAGTTGAATAAG
CTATGACCCTCTTTAGATCGTTCTGTAATATTCCAGTGGTTGCCGCAAGGAATGACGTCATAGCTCCTGCAAAAGTAATAACAATCAAAGCCGTAGGTGA
GTATTCAAATAAAGGGGAGCACCTTGCTATCATGAAAACGCCAGCAGTGACCATAGTAGCTGCATGAATCAAAGCAGATACTGGAGTGGGACCCTCCATT
GCATCGGGTAACCAAGTATGCAATCCTATCTGTGCAGATTTCCCAACAGCACCAATAAAAAGTAAAATACAAATCAGAGTTATGGCATTCAATCTCATAT
TGCAAAAAATCCATTCATTTCTGGGAGCACTAGCACAAGCAAAAATGGTTGAAAAGTCTACTGTTTGAAAGAGAGTAAAACAACCAAAAATCCCAAGAGC
TAATCCAAAATCACCTACTCGATTGACAAGCATAGCTTTTATAGCAGCTTTATCCGCCTGAAGTCGTGTAAACCAGAAATGAATTAACAAATATGAAGCA
AGACCTACTCCCTCCCATCCCAGGAATAATTGAAGAAAGTTATCTCCAGTCACCAACATTAGCATAAAAAAAGTAAAAATGGATAAATAACACATAAATC
GAGGGCTATGCGGATCCTCAGACATATATGAAATGGAATAAAGATGGACCAAGCTACTTATGAATGTAACCACAATTAACATCACTACGGTCAGGCTATC
GAACACAGACCCCAAGAAGCATCAAACATTTCCGATGATATCCATGGAGCTATTTTGAGATAGCAAGCACTAGCTCCCAGTGTGACTTCATAAAAAGCAA
TAAAAGATAAGATCGAAGAAAATTAAATGCACGTGGTGGTCATTATAGTGGTTCCTTCAGATCCTAGAAAACGTCCGAAAAAACCGGCTATGGAACTACC
GAGCAAAGGCAAAAAGACAATAAGTAGATACATAAGATCGAGTCTCTTAAAAAAAAATCAGACAATGTTCAAGCGGCCTGTCATTGAGACAAAAACGTGT
TAAGCATATAAGCACTTTCGACTTGATTTGCAGTGGTCAGTTACGCAAGATGGGAAGAGAGTTTCCTTCTTCAGAGTCCTTTTATCCCAATATTAAGGAT
AATATGTGGGCCTTTACTGAAAGAAGATGGTTGATCCCCTTGCCGACTCATTCCATCCTCCCCC