Detailed information on CNT30678701


BLAST search results

BLAST vs Swiss-Prot:
sp|O82392|THIC_ARATH, E-value = 1e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT301264Setaria viridisZea mays50.2688.1892.78194forward
CNT30483750Setaria viridisChara braunii21.2422.9785.3782forward

Expression of CNT30678701

Peptides detected in this lncRNA

>peptide 1 (62 aa)
VDLPSSFTMLFPTDCFPCSQKFSTHSIHSFLHSFLYCSVTMFICIFSNILCDFHRTKLGPTH*

>peptide 2 (62 aa)
MRYFGMTLCQISSMSSNFVGYHTCLNIITIRQPKVLHYTTPAVFPCFQEFYALGCALDLHSSP

Sequence

>CNT30678701
ACGTAGATCTCCCCTCCAGCTTCACCATGCTGTTCCCCACTGATTGTTTTCCTTGCAGCCAAAAATTCAGCACTCATAGCATTCATTCCTTCCTTCACAG
CTTCCTCTACTGTTCCGTAACCATGTTCATCTGCATATTTTCTAATATCCTCTGTGATTTTCATCGAACAAAACTTGGGCCCACACATTGAGCAGAAATG
CGCTACTTTGGGATGACCCTTTGCCAAATCAGCAGCATGAGCAGCAATTTTGTAGGATATCACACCTGTCTTAACATCATCACGATTAGGCAACCCAAGG
TGCTTCATTACACCACTCCAGCTGTTTTTCCATGTTTTCAGGAATTTTATGCATTGGGATGTGCCCTGGACCTTCATTCATCACCT